Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04941 ATGGATGTTCTTGAAGATAGGTGCCTTATATCTATTTCAAGAGGTGAAGTTTGGATGCATGATCTAATACGAGATATGGGGCGTCAAATTGTTAAGCTTCAATGTGTTGATGATCCTGCAAAACGTAGTCGATTATGGAAGGCTAGTGATATCTACGATGTTTTAAGCAAGAACAAGGGAAAAGGAACAGACGCAATCCAGTGTATATTCCTAAACGTGGATGAAATAAAGAAAGTTCAACTACATGCTGATACATTTAAGAAAATGCATAATCTTAGAATTATCGACTTCCACGAAAGGAAGAACTCAAATGTAACCTTTGATGGGTTTCTTATGAGTTTTCCTAATGATTTAAAAATTCTTCAATGGACTGGCTTCCCTCAAAGATCTTTGCCACAAAACTTTCGCCAAGAGAATCTTATTAGACTTGATATGATTTATAGCGATCTTGAAAAACTTTGGGAGGGCGATCAGGTTTTACCAAATTTGAAAAGGCTTTACCTTAGTTATTCTAGTAAGCTGATAGCACTTCCAGATCTCTCTTTCGCTCCAAATATTGAAGAAGTACATCTTAGTGATTGTGTAAGTTTGACCCAAGTTAACTCCTCTTGCATCCTCAACAAACTTTACTTCTTATGTTTGGATGGTTGTACCAAACTCAAGAGACTACCAGATCTCTCTTTGTGTCCCAATATTGAAGCAGTAAATCTTAGTGGTTGTGTAAGTTTGACACAAGTTAACTCCTCTAGCTTCCTCAACAACCTTAACTTCTTATGTTTAGCAGGTTGTACCGAACTCACGAGCTTAAATATTCCTAGCAATATTCTATCAAGTTCATCTGGATGTGTTGTTCTTCGTGATTGTTATAACCTTGAAACACTTTTAATCAGCGGTAGAATTGATTATGTGGTTCAATCATATAAAAAAAATTATGGATTTTTTAAGGTCGAAGAAATGCGAAAATTTTGTGATGAAATGGAAATAAGACTATATTGGGATCAAGGGAATTATGAGATTTGGGAATTATCTCCAGACATTCTTTCAAGTAAAAGAATCAATGATTTTTGTTGGTTAGATATTTCCAAATGTGAGTCCCTAACATGCCTACCAGCTGAACTTTTAAATTCGAAGTTTCTAACAATACTTTCTCTTAGTGGTTGTTTAAAGTTGGAGGAGTTACCTGCAATCATGGAGACTATGGAAAATTTAAAAGTGCTCGCCTTAGACGGAACAGCAATAAAAGAACTACCTTCATCCTTGCACCATTTAGTTGGGCTTGAAAAGTTGAGCTTGCACAGTTGCACAAAGCTCAAGACTATTCCATCTTCTATTGGAAACCTTAGTAAACTCCTTAAGTTAAACCTTGCCTATTGTGCATCACTTGAAAGTTTTCCAAGCAGCATTTTCAAACTGAATTTGACAGAACTCAATTTCGAAGGTTGCTCAATGCTTCAGACCTTTCCTGAAATACCAAATGACAGAGTCTGCTTGTCATCCTTGACTAAACTTTCACTGCAAGGAAGCAGTATTGTGAACCTTCCCGAGAGTATGGCTCATCTATCAAGTTTGAAATCACTTAATTTAAGTGAGTGCAAATTCCTTGAATGTGTTCCAAAGCTTCCACCAAATCTAAACCTAGTTTTCGCATTTGATTGCCCTTCCATTAAGAGTATGGTGCTAACTTCAAGGTCTGATCCTGGAGAAGGTACCTTCGAATTTTATCTCACCAATAGTCAAGAACTAGATGCAACATCTTTGAGTAATATTGGAGAGCAAGCCTGCATTAAGATCACCTATGATGCATATGCATATTGGTCAGTGGTCTTCTGCTTTCCAGGGAGCGCAGTTCCTCGATGGTTCCATTACTGTTGCAAGGGACATTCAGTAACTATGAAAACAGTTTCTCCAAATTTGTGCAGTAAAAATAGGCTCATTGGTTTTGCACTGTGTGCTGTTTTGGGACCAGAAGATATGGATGAGACCTTTAGATACAAATTTGAATTTATATCAGATGGTGAAATTTGCTCGTCTTACCACTACTTTATGCCTGAAAACCATTTGAATTGGAATATTCCAGATCCAGATATATTTCTCAAACAAAATCACACACTCCTGTGGAAGCATGAATTAAACTTAGAAGCAATTGACAATAAGATCTTTCATGCCCAAAACTTCACTTTTGAGTTTTCATCAAACAAAGTGAAAGAATGTGGAATATCTCCTCTGTTTACCAAAGAAATTGATACATGTAAGTATTGA 2259 0.3643 MDVLEDRCLISISRGEVWMHDLIRDMGRQIVKLQCVDDPAKRSRLWKASDIYDVLSKNKGKGTDAIQCIFLNVDEIKKVQLHADTFKKMHNLRIIDFHERKNSNVTFDGFLMSFPNDLKILQWTGFPQRSLPQNFRQENLIRLDMIYSDLEKLWEGDQVLPNLKRLYLSYSSKLIALPDLSFAPNIEEVHLSDCVSLTQVNSSCILNKLYFLCLDGCTKLKRLPDLSLCPNIEAVNLSGCVSLTQVNSSSFLNNLNFLCLAGCTELTSLNIPSNILSSSSGCVVLRDCYNLETLLISGRIDYVVQSYKKNYGFFKVEEMRKFCDEMEIRLYWDQGNYEIWELSPDILSSKRINDFCWLDISKCESLTCLPAELLNSKFLTILSLSGCLKLEELPAIMETMENLKVLALDGTAIKELPSSLHHLVGLEKLSLHSCTKLKTIPSSIGNLSKLLKLNLAYCASLESFPSSIFKLNLTELNFEGCSMLQTFPEIPNDRVCLSSLTKLSLQGSSIVNLPESMAHLSSLKSLNLSECKFLECVPKLPPNLNLVFAFDCPSIKSMVLTSRSDPGEGTFEFYLTNSQELDATSLSNIGEQACIKITYDAYAYWSVVFCFPGSAVPRWFHYCCKGHSVTMKTVSPNLCSKNRLIGFALCAVLGPEDMDETFRYKFEFISDGEICSSYHYFMPENHLNWNIPDPDIFLKQNHTLLWKHELNLEAIDNKIFHAQNFTFEFSSNKVKECGISPLFTKEIDTCKY 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04941 752 Gene3D Ribonuclease Inhibitor 346 492 IPR032675 -
Trre8g04941 752 Pfam Leucine Rich Repeat 139 158 IPR011713 -
Trre8g04941 752 Gene3D Ribonuclease Inhibitor 23 302 IPR032675 -
Trre8g04941 752 Gene3D Ribonuclease Inhibitor 493 588 IPR032675 -
Trre8g04941 752 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 353 549 IPR044974 GO:0006952
Trre8g04941 752 SUPERFAMILY L domain-like 356 548 - -
Trre8g04941 752 Pfam C-JID domain 611 747 IPR045344 -
Trre8g04941 752 SUPERFAMILY L domain-like 18 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04941 Trre-Chr8 52385667 52390998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04941 399 538 WRKY Transcription Factor Family AT4G12020 35.220 8.69e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04941 - - tpra:123916959 677.937