LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre8g04897	ATGTTACTCACTTCTCATCATCACCATTTCACACATTATTCACCTTCTTCTTCTTCTTCCCTCTTACGCCCCCTTCATCTCACCACTCCAATCCTCAATTTCAAATTACAATCCACATCTCACAGGTTAACCTCTTTCACCGTCAACGCCAATTCCTTCCGCCACCGATCCCAAATTTCCGTCTCCAGCCATGCCGGAGATTCCAATTTCGATTCCTTCCTTTCCTTCCTCGAACTCTCCTGCCTTCTTTCTTCCGTTATCGTATCAGCCACCGTCGCCGTGTCTTCGGTTTGGAAGAAGGAGTTGTTTGCAGCAATTTGTAACAGAGTTGCTCCTTGGAGTTTGTTGATGTTTGTAGTCGGAGTTTTTACCGGTGCTTTGATTAGGAGAAGGAAATGGAGAGAGACGGTGAACGGTGGATTTTCTGGTTCGGAGATGAATTTGTTGCAGAGGATTGAGAAATTGGAGGAGGATTTGAGAAATTCTGCGACGGTTGTTAGGGTTTTATCTAGACAGCTTGAGAAATTGGGGATTAGGTTTCGTGTTACTCGGAAATCTTTGAAGGAACCTATATCTGAGACTGCAGCTCTGGCACAGAAGAATTCTGAGGCCGCAAGAGCATTAGCCATGCAATCAGAAATTTTGGAGAAGGAGCTTGGGGAAACTCAAAAGGTTTTACTAGCAATGCAGGTACAACAGCAAAAACAACTTGATCTCATTCTTGCAATTGCGAAGGCCGGTAAGCTATGGGAAAGCAAGCGTGAAACTAGTGAAGAACACGGGAAAATAGAAATGTCTAACTCAGCTACAAATCTCAATGAGGTAAATCAGGAGGTCCACCAAGTTTGA	849	0.4417	MLLTSHHHHFTHYSPSSSSSLLRPLHLTTPILNFKLQSTSHRLTSFTVNANSFRHRSQISVSSHAGDSNFDSFLSFLELSCLLSSVIVSATVAVSSVWKKELFAAICNRVAPWSLLMFVVGVFTGALIRRRKWRETVNGGFSGSEMNLLQRIEKLEEDLRNSATVVRVLSRQLEKLGIRFRVTRKSLKEPISETAALAQKNSEAARALAMQSEILEKELGETQKVLLAMQVQQQKQLDLILAIAKAGKLWESKRETSEEHGKIEMSNSATNLNEVNQEVHQV	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre8g04897	282	Coils	Coil	152	172	-	-
	Trre8g04897	282	MobiDBLite	consensus disorder prediction	254	282	-	-
	Trre8g04897	282	MobiDBLite	consensus disorder prediction	263	282	-	-
	Trre8g04897	282	PANTHER	TRANSMEMBRANE PROTEIN	9	274	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre8g04897	Trre-Chr8	52043061	52045924	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre8g04897	51	251	Eukaryotic Initiation Factors Gene Family	AT5G65250	55.172	9.97e-61	193

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre8g04897	-		-	gmx:100790782	275.789