Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04873 ATGTTGTTGATTACTGCCATAGTAGAGGCGTGTATCACCAAGATTTGGAGCCAGAGAATCTTCTTTTGGACGGCTGAGTTCACATGTCCGCCTTGGTTTTCGCCTGAGGCAAAGAAACTGCTCAAGTCTATACTTAATCCGAACCCTCTAACGAAGATAAAGATTCCGGAAATCTTGGAAGATGAATGGGTCAAAAAAGGATACAAGCCGGCATCTTTTACCGAGGAAGACGGTATTAATGTAGATGATGTTGCTGCTACTTTCAATGATTCTAAGGAAAATCTCGTGACAGAGACAAAAGAAAAGCCAGTGTCGATGAATGCTTTTGAGCTTATTTCTAGATCACAAAGTTTCAATCTTGACAATTTGTTTGAGAAGCAAAAGATGAAGCTGCAAGGTGATAAAAGTGGTAGGAAGGGTCAGCTTTCAGTGGCTACCGAGGTGTTCAATGATCTTACGGCATTAACATATTGA 474 0.4093 MLLITAIVEACITKIWSQRIFFWTAEFTCPPWFSPEAKKLLKSILNPNPLTKIKIPEILEDEWVKKGYKPASFTEEDGINVDDVAATFNDSKENLVTETKEKPVSMNAFELISRSQSFNLDNLFEKQKMKLQGDKSGRKGQLSVATEVFNDLTALTY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04873 157 ProSiteProfiles NAF domain profile. 101 125 IPR018451 GO:0007165
Trre8g04873 157 Gene3D Kinase associated domain 1, KA1 100 130 - -
Trre8g04873 157 SUPERFAMILY Protein kinase-like (PK-like) 20 70 IPR011009 -
Trre8g04873 157 Pfam NAF domain 103 127 IPR004041 GO:0007165
Trre8g04873 157 Gene3D Transferase(Phosphotransferase) domain 1 6 71 - -
Trre8g04873 157 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 24 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04873 Trre-Chr8 51837382 51839258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04873 25 149 CBL-interacting serine-threonine protein kinases AT1G01140 54.545 9.32e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04873 - - gmx:100794136 205.297