Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04857 ATGTCGAAACCCTGGGGCAACATCGGAGCTTGGGCCGCCGATTCCGAGGCTGCCGAAGCCGAGGAACGTGAAGCCGCGGCTAAGGAAGCTTCCGCCGGGTCGGATAACTTCCCGAGTTTGAAAGAAGCCGTTACTTCTAAGCCGAAGAAGAATAAGAAGATGTCGCTTTCTGAGTTCGCACGTGGCGGTTACTCTTCCGGTGGTGGCGCCACCGATTATCCTCGATTGACACCGGATGAGATGCTTCGTCTTCCTACCGGTCCTAAGGAACGTTCTGCTGAGGAAATGCAGTTTAACCGTCTCGGCGGTGGTTTTTCCAATTTTGACCGCGGTGGTCGTGGAAGGGATCGTGATGGTGGCTCTGGAGATGCTAATTGGGGTGCTGGAAGAAGATCTTATGGGGGATTTGATGATGAACGTAGGGCTCCGAATTCTAGGGTTTCGGATTTTGATCAGCCGTCGAGGGCTGATGAGGTGGATAACTGGGCGTCGGTGAAGAAGACACTCCCTTCGTTTGATTCTGGTAGGCAGAATCGATATGGGGGTGGTGGTGGCGGTGGTGGTGGTGGTGGTTTTGGTGGTGAATCTAAGGCTGATGGAGTGGACAATTGGGCGGTTGGTAAGAAACCTCTCCTCGTTAGATCTTCTGGTTATGGTTATCGTGATTCTGGAACGGAACCAGATCGGTGGTCTAGGGGTTCTGCTGTTGAACCAGATCGCTGGGCCAGAGGTGCACCTCGTGAAACGGAGCAGCAGCGACCGAGGTTGGTGTTGGATCCAAGGAAAAATGATGGTTCAGTGAATGAAGCTCCGGTGGTGAAGACAAATAAGCCGAATCCATTTGGTGCGGCGAGGCCTAGGGAGGAAGTGTTAGCTGAGAAAGGATATGATTGGAAGAAGCTAGATTCTGAGATTGAGGCGAAAAATAGGCCTACAAGTTCACATTCCAGCAGGCCTTCAAGTGCTCAGTCCAATCGCTCTGAGGGTCCAGATGGTGCGGTGAAACCGAGGCCAAAGGTGAATCCCTTTGGGGATGCCAAACCCAGGGAGGTTTTGCTTAGCGAGCGTGGCAAGGATTGGCGGAAGATTGATCTGGAATTGGAGCATCGTGCTGTTGATAGGCCTGAGACCGTGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAGAAGGAGTCTACAATAAATTCAAATAAGGAATCTGCGGATGATGCTGGTGTAGACCAAACCGGTCCACGTGCAATGCTACAAGAGAAAGAAAGGGAGCTGGAACTACTTATCCGTGATTTGGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCGTCAGCAGGAAAGACTGCTGGTTTTTCTGATAGGCCACCGTCTCGTTCTGGCTCATTTGAGGATTCTAGAAGTGTGGATTTTACGGACCGACCTCGATCCCGTGGCACAGGAGATATGTCGATGCGTCCTACTGATGACAGAAGACAATTTCAAGGTAGCAGGGAAAGAGGGTGGTTTTCGAACAGCAGAGACTTGAATAGGTCAAGGTCCAGAGAGGGATGGTGA 1578 0.5057 MSKPWGNIGAWAADSEAAEAEEREAAAKEASAGSDNFPSLKEAVTSKPKKNKKMSLSEFARGGYSSGGGATDYPRLTPDEMLRLPTGPKERSAEEMQFNRLGGGFSNFDRGGRGRDRDGGSGDANWGAGRRSYGGFDDERRAPNSRVSDFDQPSRADEVDNWASVKKTLPSFDSGRQNRYGGGGGGGGGGGFGGESKADGVDNWAVGKKPLLVRSSGYGYRDSGTEPDRWSRGSAVEPDRWARGAPRETEQQRPRLVLDPRKNDGSVNEAPVVKTNKPNPFGAARPREEVLAEKGYDWKKLDSEIEAKNRPTSSHSSRPSSAQSNRSEGPDGAVKPRPKVNPFGDAKPREVLLSERGKDWRKIDLELEHRAVDRPETVEEKLLKEEIDNLKKELEKESTINSNKESADDAGVDQTGPRAMLQEKERELELLIRDLDDKVRFGQKAVERPGSSAGKTAGFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMSMRPTDDRRQFQGSRERGWFSNSRDLNRSRSREGW 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04857 525 Pfam Plant specific eukaryotic initiation factor 4B 1 508 IPR010433 GO:0003743
Trre8g04857 525 MobiDBLite consensus disorder prediction 511 525 - -
Trre8g04857 525 MobiDBLite consensus disorder prediction 1 290 - -
Trre8g04857 525 Coils Coil 418 438 - -
Trre8g04857 525 MobiDBLite consensus disorder prediction 312 328 - -
Trre8g04857 525 Coils Coil 380 407 - -
Trre8g04857 525 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 521 IPR010433 GO:0003743
Trre8g04857 525 MobiDBLite consensus disorder prediction 473 504 - -
Trre8g04857 525 MobiDBLite consensus disorder prediction 133 162 - -
Trre8g04857 525 MobiDBLite consensus disorder prediction 394 425 - -
Trre8g04857 525 MobiDBLite consensus disorder prediction 225 262 - -
Trre8g04857 525 MobiDBLite consensus disorder prediction 442 525 - -
Trre8g04857 525 MobiDBLite consensus disorder prediction 302 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04857 Trre-Chr8 51742108 51747287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04857 1 525 Eukaryotic Initiation Factors Gene Family AT3G26400 53.901 5.84e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04857 - - gmx:100784238 680.248