Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04831 ATGTTAGAAACTGGTGCAGCACGTGATTCTGAGTTAAGTTTAGAGACTGTCAATTCAACTCAGCGAAGAAGTTCAATGAGCAGTGAAAGCATTTGCAGCACCAGTTTTAGTCGTCTATCATTCGACCTACTTCCGTCTTCTCCGGAAAGTCTCTCCATCAAGCCTCACCGTTCTTCCGACTTCGCTTACTCCGCTATCCGTTCCGCCGCATTCCGTCGCAAATCAGCGCTTACTTTCCGTGACTTCCATCTCCTCCGCCGTATCGGTGCCGGCGACATTGGAACTGTTTACCTCTGCCGTCTCAGAAACGGAAATGACAAATTCGAAAGCTGTGAAAAAGACAACGCGTGTTGCTTGTACGCGATGAAGGTTGTTGATAAAGACGCTGTCGCATTGAAGAAGAAATCACAGAGAGCTGAAATGGAGAAAAAGATTCTGAAAATGCTTGATCATCCTTTTCTTCCTACACTCTACGCTGAGTTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAGTTTTGTTCCGGTGGTGACTTGCATTCCCTACGCCACAAACACCCTCATAACCGTCTTCCTCTTCCTTCCGCCAGATTTTATGCGGCTGAGGTATTGGTGGCTATGGAGTACCTTCACATGTTAGGAATCATTTACAGAGATCTAAAGCCTGAGAATGTTTTAGTTAGATCCGACGGTCATATCATGCTTTCAGATTTTGATCTTTCACTTTGCTCTGATGCAACCCCTGCCGTTGAATCATCAGATATTTTACAAGATTCCGCGTTTTCATCAACATTACCCTACACTCGCTCGCGTTCTTTTCCTACTCCATTCACTTGCTTTTCAAACCGGTTGTTTAAGTCACGTAAGGTTCAAACCATTCAACCGAACCGGCTTTTCGTTGCTGAACCGGTTTCTGCCCGGTCTTGCTCTTTTGTTGGAACACATGAGTATGTCTCACCGGAAGTAGCCGCCGGAAACTCTCATGGAAACGCCGTAGACTGGTGGTCGTTTGGGATATTTATCTATGAGCTTATATATGGCCTATTCCCAACCCTACCCACAGCAACGCCTTCGAGCACGCTTGAATTCCACGCGCGTGACTTAATATCCGGGTTGCTTAACAAAGATCCAGCTCAACGACTCGGGTCAAAGCGCGGCGCGGCTGACGTAAAGAAACACCCGTTTTTCAAAGGGATTAATTTGGCGCTGATTCGTATGTTGACGCCGCCCGAAGTTCCTGGCTCAAGAAGGCCTAAAACGACGCCGTTGTATAGTGGGAAGAGTAATGGTTGTAGTAAACGGCAACAAACGGCGTCGTTTGATATTTTCTTTTAA 1335 0.4622 MLETGAARDSELSLETVNSTQRRSSMSSESICSTSFSRLSFDLLPSSPESLSIKPHRSSDFAYSAIRSAAFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRNGNDKFESCEKDNACCLYAMKVVDKDAVALKKKSQRAEMEKKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKHPHNRLPLPSARFYAAEVLVAMEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESSDILQDSAFSSTLPYTRSRSFPTPFTCFSNRLFKSRKVQTIQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELIYGLFPTLPTATPSSTLEFHARDLISGLLNKDPAQRLGSKRGAADVKKHPFFKGINLALIRMLTPPEVPGSRRPKTTPLYSGKSNGCSKRQQTASFDIFF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04831 444 Gene3D Transferase(Phosphotransferase) domain 1 308 413 - -
Trre8g04831 444 Gene3D Transferase(Phosphotransferase) domain 1 174 242 - -
Trre8g04831 444 MobiDBLite consensus disorder prediction 411 430 - -
Trre8g04831 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Trre8g04831 444 ProSiteProfiles Protein kinase domain profile. 82 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04831 444 FunFam protein kinase PINOID 2 80 173 - -
Trre8g04831 444 MobiDBLite consensus disorder prediction 1 21 - -
Trre8g04831 444 FunFam protein kinase PINOID 174 242 - -
Trre8g04831 444 SUPERFAMILY Protein kinase-like (PK-like) 64 413 IPR011009 -
Trre8g04831 444 Gene3D Phosphorylase Kinase; domain 1 80 173 - -
Trre8g04831 444 Pfam Protein kinase domain 308 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04831 444 Pfam Protein kinase domain 82 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04831 444 SMART serkin_6 82 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04831 444 PANTHER FLIPPASE KINASE 1-RELATED 19 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04831 Trre-Chr8 51592761 51594940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04831 9 443 AGC Kinase Gene Family AT2G34650 61.688 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre8g04831 Pkinase 3.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04831 - - vun:114177159 682.559