Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04818 ATGGAGAACACATATGGGGCACATTTAGTGATGGTGCTGTGTTTCTTGGGGATGCTTCTAATTATGCCTTCTTATTGCCAAGATGATTTAGATGATGGAACTAATGCTGTTTATATTGTTACTCTTAGACAAGTCCCTACTTCTCATTATCAGGATGAGTTGAGCAGAGTTTATAACCACTTCAGACATAGTGCTTCTGGGAGAACCAGAAGTCACAAACCAAGACATCAAAATGTTACAAAAACTGATAAGAAACGCGGTTTTAACATTGCGCAAGTTCATGATTCGCTGTTGAAGAAGGTGTTTAAAGGGGAAAAGTATCTGAAACTCTATAGCTATCATTACTTGATCAATGGATTTGCTGTACTTCTTAGCCAACAGCAGGCAGATAAGCTATCAAGGAGAAGAGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTAAGAACTGCAACCACACACACTCCACAGTTTCTTGGTCTCCCACAGGGAGCTTGGTTTCAATCAGGTGGGTTTGAAACTGCTGGAGAAGGAATCACTATTGCATTTGTTGACACTGGCATTGATCCTAAACACCCAAGTTTCGCTGATGATAAATCTGAACATCCATTCAACGTTCCTGCTCGTTTTTCTGGCACCTGCGAGGTTACTCGGGATTTTCCATCTGGTTCTTGTAATAGGAAGCTTGTTGGGGCCCGTCATTTTGCAGCATCTGCTATAACCAGAGGAATGTTTGATTCAACTGAGGACTATGCTTCTCCCTTCGATGGTGATGGCCATGGCACGAACACAGCTTCTATTGCAGCTGGAAACCATGGAATTCCAGTGGTTGTTGCTGGGTATAATTTTGGTAATGCTAGTGGAATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTATACAAGGGATTTGGAGGATTTGCCGCAGATGTTGTTGCAGCTATTGATCAGGCAGCTCAAGATAAGGTTGATATATTATGCTTGTCAATCACTCCTAATATGCGTCCTCCCGGTATTGCAACTTTCTTCAATCCAATAGACATGGCATTGTTGTCAGCTATAAAAGCTGGTATTTTTGTTGTGCAAGCTGCTGGAAATACCGGACCTTCGTCTATGAGCATGTCCTCCTTTAGTCCGTGGATCTTTACTATTGGTGCCACCTCTCATGATCGACTTTATACCAACTCGCTATCTCTTGGAAATAATGTGACTGTACTCGGAGTTGGACTTGCACCTAGCACATCTGAGAACACAATGTACAAATTGATTCATGCACATCATGCTTTGAACGATGACACAACAATTGCTGATGATATGTATGTTGGTGAGTGTCAAGATGCAAGTAAGTTCAATAAAGATTTGGTCCAAGGAAACATCCTAATGTGTAGTTATACAATGCGATTTGTTCTTGGTCTCTCCAGCATCAACAAGGCCTTAGAAACAGCCATGAATCTTAGTGCCGCTGGTGTTGTTTTCCCCATGAATCCTTCTGTGAACGGTTTTGAACTTGACCCAATTCCAATGAAAATTCCCGGCATAATAATTCCATTAGCAACTGATTCCAAGATATTACTAGAATACTACAATTCTTCGATAGAAAAAGACGGTACTTCAGAAAAAATTGTTAAACTTGGGGCTTTTGCTAGCATTAATGGCGGACTTACGGCAAGCTATGGTAATGTTGCACCAAGTGTTATGTATTACTCTGCCAGAGGACCAGATCCAGAAGACAGTCTTCCTCATGAAGCTGACATTTTGAAACCCAATCTGGTAGCTCCTGGAAGTTTAATATGGGCTGCTTGGAGTTCTGTTGCCACTGATTCAGATGAATTTCTAGGTGAAAATTTTGCAATGATGTCCGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAATCAAGCAAAAGTTTCCCAATTTCAGCCCTGCTGCCATTGGATCTTCACTTTCCACCACGGCATCTCTGAATGACAACAGTGGGAAGCCAATAATGGCTCAGCGGACATATCCCTCCCCGGACCTAAACAAATCTCCTGCAACTCCCTTTGACATGGGAAGTGGTTTTGTAAATGCTACGGCAGCATTAAACCCGGGATTGCTTTTCGATTCAAGTTATGATGATTACATTTCTTTTCTATGTGGTATCAATGGTTCAGCCTCTGCGGTGCTAGACTACACTGGTCAGAATTGTTGGACTCATAACTCGATTGTATATGGCTCTGATCTAAACTTTCCCTCAATCACTATAGCAAGGTTGGACCAATCTAGAGTAGTGCAGAGAACAGTACAAAACATTGCTGGAAATGAAACTTTTAGTGTTGGTTGGAGTTCTCCATATGGAGTTTCAGTGAAAGTATCTCCAACTCGCTTCTCTATTGACAACGGAGAGAGACAAGTCTTATCTGTAATCTTCAATGCAACAAGCAACAGCTCTACTGCCAGCTTTGGAAGGATTGGATTGTTTGGTAATCAAGGCCACGTAGTCAACATTCCTGTGTCAGTCATTGTTAAAATCTCACTATGA 2532 0.4202 MENTYGAHLVMVLCFLGMLLIMPSYCQDDLDDGTNAVYIVTLRQVPTSHYQDELSRVYNHFRHSASGRTRSHKPRHQNVTKTDKKRGFNIAQVHDSLLKKVFKGEKYLKLYSYHYLINGFAVLLSQQQADKLSRRREVSNVVLDFSVRTATTHTPQFLGLPQGAWFQSGGFETAGEGITIAFVDTGIDPKHPSFADDKSEHPFNVPARFSGTCEVTRDFPSGSCNRKLVGARHFAASAITRGMFDSTEDYASPFDGDGHGTNTASIAAGNHGIPVVVAGYNFGNASGMAPRSHIAVYKALYKGFGGFAADVVAAIDQAAQDKVDILCLSITPNMRPPGIATFFNPIDMALLSAIKAGIFVVQAAGNTGPSSMSMSSFSPWIFTIGATSHDRLYTNSLSLGNNVTVLGVGLAPSTSENTMYKLIHAHHALNDDTTIADDMYVGECQDASKFNKDLVQGNILMCSYTMRFVLGLSSINKALETAMNLSAAGVVFPMNPSVNGFELDPIPMKIPGIIIPLATDSKILLEYYNSSIEKDGTSEKIVKLGAFASINGGLTASYGNVAPSVMYYSARGPDPEDSLPHEADILKPNLVAPGSLIWAAWSSVATDSDEFLGENFAMMSGTSMAAPHVAGLAALIKQKFPNFSPAAIGSSLSTTASLNDNSGKPIMAQRTYPSPDLNKSPATPFDMGSGFVNATAALNPGLLFDSSYDDYISFLCGINGSASAVLDYTGQNCWTHNSIVYGSDLNFPSITIARLDQSRVVQRTVQNIAGNETFSVGWSSPYGVSVKVSPTRFSIDNGERQVLSVIFNATSNSSTASFGRIGLFGNQGHVVNIPVSVIVKISL 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04818 843 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 148 IPR037045 -
Trre8g04818 843 Gene3D - 715 839 - -
Trre8g04818 843 ProSiteProfiles Serine proteases, subtilase domain profile. 155 698 - -
Trre8g04818 843 Pfam Subtilase family 175 660 IPR000209 GO:0006508|GO:0008236
Trre8g04818 843 CDD PA_subtilisin_like 396 531 - -
Trre8g04818 843 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 180 191 IPR023827 -
Trre8g04818 843 Pfam Fibronectin type-III domain 744 837 IPR041469 -
Trre8g04818 843 Gene3D Peptidase S8/S53 domain 177 711 IPR036852 GO:0004252|GO:0006508
Trre8g04818 843 Gene3D - 390 558 - -
Trre8g04818 843 PRINTS Subtilisin serine protease family (S8) signature 255 268 IPR015500 -
Trre8g04818 843 PRINTS Subtilisin serine protease family (S8) signature 620 636 IPR015500 -
Trre8g04818 843 PRINTS Subtilisin serine protease family (S8) signature 175 194 IPR015500 -
Trre8g04818 843 Pfam Peptidase inhibitor I9 37 150 IPR010259 -
Trre8g04818 843 CDD Peptidases_S8_3 150 657 IPR034197 -
Trre8g04818 843 ProSitePatterns Serine proteases, subtilase family, serine active site. 621 631 IPR023828 -
Trre8g04818 843 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 103 836 IPR045051 -
Trre8g04818 843 SUPERFAMILY Subtilisin-like 150 702 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04818 Trre-Chr8 51503348 51508044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04818 9 842 Subtilisin-like Serine Gene Family AT4G20430 64.894 0.0 1119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04818 - - gmx:100814065 1323.53