Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04815 ATGGCTTTGTTTTCACATTCACTTTTTCATTTTGCCATATTAATGATCCTTATCCCAATTGATTTCAACCACCTTTTGGTTGGTGTATCATCAACCACTTTAAGCATTATCACAGATAAAGAAGCCTTAATCTCATTAAAATCTCAATTAAGTAATAATGACTCTTCTAATTCTCATACATTATCCTCTTGGAGCAAGAACTCATCTCCTTGCAATTGGACTGGTGTCTTATGTGACAAGCATAACCAAAGAGTGATTGGGTTAGATCTTTCAGGCATTGGACTCTCAGGTAACTTAAGTCCTTATATAGGTAACTTGTCCTCTCTTCAGTCCCTTCAATTGCAGGATAACAAGCTCACAGGAATCATTCCTAACCAAATCACCAATCTATATAGTTTGAGAGTTCTAAATATGAGTTCTAACAGATTTGAAGGAATCATGATCCCTTCAAATCTTACCAATTTAGATGAGCTTCAGATTCTTGATTTGTCTTCAAACAAGATTGTAAGCAGAATTCCAGAAAACATTAGCAGCTTGAAAAAGTTGCAGGTGTTGAAACTTGGAAGGAATAACTTCTATGGTACAATTCCACAATCACTAGGAAATATTTCTTCTCTAAAGAATATAAGTTTTGGCACCAACTCTCTTAGTGGATGGATTCCTAGTGAATTAGGTAAGTTACATAATTTAATTGAGCTTGATCTTACTCTTAACAATCTTACTGGAACTGTTCCATCTGTTGTATACAACTTGTCTTCCCTTGTTAACTTGGCCTTAGCTGCAAACTCCTTTTGGGGTGAGCTACCTTATGATGTTGGTCATAAACTTCCAAAACTATTAGTTTTCAATTTCTGCTTCAATAAGTTCACAGGTAGAATTCCAGGGTCTTTACACAATCTCACAAACATTAGGGTCATTCGAATGGCCTTTAACCGTTTGGAAGGAACAGTTCCACCTGGTTTAGGAAACCTTCCATTTCTTCACATGTATAATATTGGCTATAACAGGATAGTCACCTCAGGGGTCAATGGTTTGGACTTCATTACTTCATTAACTAACAGCACTCACTTGAACTTTCTTGCAATTGATGGAAATATGCTTGAAGGTGTGATTCCTGAAAGCATTGGAAATCTCTCTAAGGAGCTCTCCCAATTATACATGGGAGAGAACCGTTTCAATGGAAGCATACCATCTTCTATTGGTCGTCTTAGTGGTTTGAAGTTGTTAAATTTGAGCTACAATTCAATCAGTGGTGAGATTCCAAAGGAGTTAGGCCAGTTAGAGGAACTGCAAGAGCTATATCTAGATGGAAATAAGATATCAGGATCTATTCCAAACTCTCTTGGTAATCTTATAAAGTTAAACAAGATTGATTTGTCGAAAAATGAACTTGTAAGTAGAATACCAATCAGTTTTGGTAAGTTTCAAAACCTGCTCTACATGGACTTATCTTGCAACAAACTCAATGGTAGCATACCTGTTGAAATCCTCAATCTACCAACTTTGAGCAATGTTTTAAACTTATCAAACAATTTGTTGAGTGGACCAATACCTGAAGTTGGGAAATTGACTACCATTGCCTCTATAGACTTTTCCAACAACCAATTGTATGGAAGCATTCCAAGCTCATTCAGCAGTTGTTTGAGCTTGGAGAAATTGTTCTTATCCAAGAATATGCTTTCGGGTTCCATTCCGAAAGCTCTTGGAGAAGTGAGAGGCTTGGAAACTTTGGACTTGTCCTCCAACCTACTCTCTGGATCCATTCCTATTGAACTTCAAAACCTGCATGTCCTTCATCTTTTAAACCTCTCTTACAATGATTTTGAAGGGTCCATTCCTAGCGACGGAGTTTTCAACAATCTCTCTAATGTACACTTAGTAGGCAATAAAAAATTATGCTTGCATTTTGCATGTGTGCCTCGAGTCCATAGAAGAACAAATGCCAGATTTTATATCATCATAGCTGTTGTGTTAACATTGGTAATATGTCTCCCAATTGGTTTGCTACTAATACTATACATCAAGTATACAAAGGTGAAGGTAACAGCAAAAACACCATTTGAACAGCTTAATCCAAAGGTTCCAATGGTCTCTTACGACAAACTTCGATTAGCAACTAAGGAGTTCAGCCAAGAAAATTTAATAGGAATTGGAAGTTTTGGATCAGTGTATAAAGGCCATCTAAGTCAGGAAAATATTGTTGCAGTGAAAGTGCTTGACACTCAAAGAACAGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGAGGCTATGAAAAATTCAAGGCATAGAAATTTGGTTAAGCTAATCACATCATGCTCTAGCGTTGACTTTAAAAACAATAGTTTTCTGGCTTTGGTGTATGAGTATATAAGTAATGGAAGCTTGGAAGATTGGATTAAGGGGAAGAGAAAGTATGAAAATGGAAATGGTTTGAACCTTATGGAGAGAGTGAATATAGCTATAGATGTTGCTTGTGCATTAGATTACCTACACAATGATAGTGAAACTCCTATTGTGCACTGTGATCTAAAACCAAGCAATATTCTCCTGGATGAAGATATGACTGCAAAGGTTGGAGACTTCGGTTTGGCTAGGTTTCTGATTCAAAGTTCAACTGATCAAGTTTCCATCTGCTCCAATCATGTCCTTAGAGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCTTCAACAGCAGGAGATGTATATAGTTTTGGGATAGTGTTACTAGAGCTCTTCTCTGGGAAAAGTCCACAAGATGATTGCTTCAATGGAGACCTGAGCATAACAAAATGGGTGCAATCAGCATTCAAAAACAAGGCTATACAAGTCATTGACACTCAGCTGTTATCCTTAATTTTCCATGATGATTCTGCTAGAGACTCCAATCTACAGCTTCATTGTGTGGATGCAATTATGGGAGTCGGCATGTCTTGCACTGCAGACAATCCGGATGATCGCATTGGCATTAGAGTTGCTGTTCGCCAACTAAAAGCTGCTAGGGACAGTCTTATGAACCAATCTAATATTTATATTAGGAGTCCTACTGATTATACAGTTATTGCGTCAACGCAGTAA 3090 0.3741 MALFSHSLFHFAILMILIPIDFNHLLVGVSSTTLSIITDKEALISLKSQLSNNDSSNSHTLSSWSKNSSPCNWTGVLCDKHNQRVIGLDLSGIGLSGNLSPYIGNLSSLQSLQLQDNKLTGIIPNQITNLYSLRVLNMSSNRFEGIMIPSNLTNLDELQILDLSSNKIVSRIPENISSLKKLQVLKLGRNNFYGTIPQSLGNISSLKNISFGTNSLSGWIPSELGKLHNLIELDLTLNNLTGTVPSVVYNLSSLVNLALAANSFWGELPYDVGHKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMAFNRLEGTVPPGLGNLPFLHMYNIGYNRIVTSGVNGLDFITSLTNSTHLNFLAIDGNMLEGVIPESIGNLSKELSQLYMGENRFNGSIPSSIGRLSGLKLLNLSYNSISGEIPKELGQLEELQELYLDGNKISGSIPNSLGNLIKLNKIDLSKNELVSRIPISFGKFQNLLYMDLSCNKLNGSIPVEILNLPTLSNVLNLSNNLLSGPIPEVGKLTTIASIDFSNNQLYGSIPSSFSSCLSLEKLFLSKNMLSGSIPKALGEVRGLETLDLSSNLLSGSIPIELQNLHVLHLLNLSYNDFEGSIPSDGVFNNLSNVHLVGNKKLCLHFACVPRVHRRTNARFYIIIAVVLTLVICLPIGLLLILYIKYTKVKVTAKTPFEQLNPKVPMVSYDKLRLATKEFSQENLIGIGSFGSVYKGHLSQENIVAVKVLDTQRTGSLKSFFAECEAMKNSRHRNLVKLITSCSSVDFKNNSFLALVYEYISNGSLEDWIKGKRKYENGNGLNLMERVNIAIDVACALDYLHNDSETPIVHCDLKPSNILLDEDMTAKVGDFGLARFLIQSSTDQVSICSNHVLRGSIGYIPPEYGWGEKPSTAGDVYSFGIVLLELFSGKSPQDDCFNGDLSITKWVQSAFKNKAIQVIDTQLLSLIFHDDSARDSNLQLHCVDAIMGVGMSCTADNPDDRIGIRVAVRQLKAARDSLMNQSNIYIRSPTDYTVIASTQ 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04815 1029 Gene3D Transferase(Phosphotransferase) domain 1 790 1020 - -
Trre8g04815 1029 SUPERFAMILY L domain-like 39 337 - -
Trre8g04815 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Trre8g04815 1029 Gene3D Phosphorylase Kinase; domain 1 679 789 - -
Trre8g04815 1029 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 237 343 - -
Trre8g04815 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 680 789 - -
Trre8g04815 1029 ProSiteProfiles Protein kinase domain profile. 709 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04815 1029 Gene3D Ribonuclease Inhibitor 344 640 IPR032675 -
Trre8g04815 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 344 643 - -
Trre8g04815 1029 SMART LRR_typ_2 427 451 IPR003591 -
Trre8g04815 1029 SMART LRR_typ_2 475 499 IPR003591 -
Trre8g04815 1029 SMART LRR_typ_2 300 324 IPR003591 -
Trre8g04815 1029 SMART LRR_typ_2 571 594 IPR003591 -
Trre8g04815 1029 SMART LRR_typ_2 155 179 IPR003591 -
Trre8g04815 1029 SMART LRR_typ_2 130 151 IPR003591 -
Trre8g04815 1029 SMART LRR_typ_2 227 251 IPR003591 -
Trre8g04815 1029 SMART LRR_typ_2 106 129 IPR003591 -
Trre8g04815 1029 SMART LRR_typ_2 595 620 IPR003591 -
Trre8g04815 1029 SMART LRR_typ_2 403 426 IPR003591 -
Trre8g04815 1029 FunFam Leucine-rich repeat receptor-like protein kinase 37 198 - -
Trre8g04815 1029 SMART LRR_sd22_2 106 132 - -
Trre8g04815 1029 SMART LRR_sd22_2 227 253 - -
Trre8g04815 1029 SMART LRR_sd22_2 427 453 - -
Trre8g04815 1029 SMART LRR_sd22_2 155 178 - -
Trre8g04815 1029 SMART LRR_sd22_2 571 592 - -
Trre8g04815 1029 SUPERFAMILY L domain-like 382 633 - -
Trre8g04815 1029 SUPERFAMILY Protein kinase-like (PK-like) 690 1001 IPR011009 -
Trre8g04815 1029 PANTHER OS04G0122200 PROTEIN 225 999 - -
Trre8g04815 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 790 1013 - -
Trre8g04815 1029 Pfam Leucine rich repeat N-terminal domain 38 79 IPR013210 -
Trre8g04815 1029 ProSiteProfiles Leucine-rich repeat profile. 157 180 IPR001611 GO:0005515
Trre8g04815 1029 SMART serkin_6 709 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04815 1029 Pfam Leucine rich repeat 105 143 IPR001611 GO:0005515
Trre8g04815 1029 Pfam Leucine rich repeat 527 584 IPR001611 GO:0005515
Trre8g04815 1029 Pfam Leucine rich repeat 381 440 IPR001611 GO:0005515
Trre8g04815 1029 Pfam Protein kinase domain 710 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04815 1029 ProSitePatterns Protein kinases ATP-binding region signature. 715 737 IPR017441 GO:0005524
Trre8g04815 1029 Gene3D Ribonuclease Inhibitor 38 151 IPR032675 -
Trre8g04815 1029 Gene3D Ribonuclease Inhibitor 152 247 IPR032675 -
Trre8g04815 1029 Gene3D Ribonuclease Inhibitor 248 343 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04815 Trre-Chr8 51483435 51486778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04815 38 1021 Receptor kinase-like Gene Family AT5G20480 41.112 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre8g04815 Pkinase 5.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04815 - - gmx:100783512 1492.25