Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04814 ATGTTTGGTCCTGCTGCAAACAAATTCATCTCAATGAATGAACAAAAACTTGTCAAAGTTTGGTACTTAAAAACTCAGTGCAAGTTATTCAATCTTCCTGATCAAAATCAGACACAAGAAGCTATGCAAAAACAAGTAGTTGTAGCTTCTGCTCCAGTTAAAATCTTGGGATTTCTTAAGCCTGAAGGAATAGTTAGGTACATGAGAAACAACAACATTGAATCAATCATACACAAACATTTCATGACACATTGGGAAGGAAAAACAGAACTAAAAGTGTACCCTTTGGTGAAATCTTTTACAATTTCATTAGCCTTTCAATTTTTCTTAGGAATTGATGAATCTAATTATGTAGCTAAATTTGCAACAAAGTTTGAAAATTTGTATTATGGGATTTATTCAGTTCCTGTGAACTTTCCTGGCTCAAGATATCATAAAGCAATGAAGGGTGCATCTGAAATTAGGAAAGAGATTCAGCTTTTGATTAATGACAAGATTGATGGTTTATCTAAGGGGAAAATTATGGATGATTTATTAGCACATATTGTTGATGCTGAGAAGAGTGGAAAATATGTGCCTAAAATTGAAATAAGTAATATCATCATGGGGTTGATCAATTCTAGCTATATCTCAATAGCTATCACTTTGGCTTTCATGATCAAACACATTGGAATGAGACCTCATATCTACCAAAGAATCTTATCAGAGCATGGTGAAATTGTAAGATCAAAAGGAAGTGGTACAGTGCTAGATTGGGAGAGCATACAGAAGCTAAAATATACATGGGCTGTTGCACAGGAGACCATGAGACTCTACCCAGCAGCAGCAGGAGCATTCAGAGAGGCTAAAACAGATATCAACTATGAAGGTTTTACCATTCCAAAGGGATGGAAGATATTTTGGGCATTTATTGGAACAAATAAGAATCACAAGTACTTTGATGAACCTGAAAATTTTGATCCATCAAGGTTTGAAGGGAATGTTCCAGCACCATACACTTATATACCCTTTGGAGCAGGACCAAGATGTTGTCCTGGAAAGGACTACACTCGATTTGTGATTATCACTTTCATTCACAATCTTGTAACAAACTTCAAATGGGAAGTTATATTTCCAGATGAGAAAGTATCTGGTGCTTTGGTGCCTATCCCAGCTAAGGGAATTCCTATCCGTCTTCATCACTTGTAA 1188 0.3577 MFGPAANKFISMNEQKLVKVWYLKTQCKLFNLPDQNQTQEAMQKQVVVASAPVKILGFLKPEGIVRYMRNNNIESIIHKHFMTHWEGKTELKVYPLVKSFTISLAFQFFLGIDESNYVAKFATKFENLYYGIYSVPVNFPGSRYHKAMKGASEIRKEIQLLINDKIDGLSKGKIMDDLLAHIVDAEKSGKYVPKIEISNIIMGLINSSYISIAITLAFMIKHIGMRPHIYQRILSEHGEIVRSKGSGTVLDWESIQKLKYTWAVAQETMRLYPAAAGAFREAKTDINYEGFTIPKGWKIFWAFIGTNKNHKYFDEPENFDPSRFEGNVPAPYTYIPFGAGPRCCPGKDYTRFVIITFIHNLVTNFKWEVIFPDEKVSGALVPIPAKGIPIRLHHL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04814 395 PRINTS E-class P450 group I signature 216 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04814 395 PRINTS E-class P450 group I signature 344 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04814 395 PRINTS E-class P450 group I signature 334 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04814 395 PRINTS E-class P450 group I signature 302 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04814 395 Gene3D Cytochrome P450 1 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04814 395 Pfam Cytochrome P450 117 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04814 395 SUPERFAMILY Cytochrome P450 79 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04814 395 PANTHER CYTOCHROME P450 26 3 377 - -
Trre8g04814 395 CDD CYP90-like 3 394 - -
Trre8g04814 395 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 337 346 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04814 Trre-Chr8 51479285 51481101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04814 3 299 Cytochrome P450 AT5G36110 33.110 5.88e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04814 K20667 - tpra:123917065 770.385