Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04813 ATGGATACTTTCATGCAATCCTTGTTACTAATTTTGATTACCTTAATAGCATCAATCTATGTTTTCCACAAAACAAAACAAAGTACCATAAAAAACTTGCCACATGGTACTTTTGGTTGGCCTATAGTTGGTGAAACATACCAATTTTTGTTCCAAAAAATTGAAAATTTTCTTCAAGTGAGAGTTAAAAAGTACTCATCAAAGATTTTCAAAACAAAACTATTTGGAGAATCAACAGTGGTTATGTTTGGTCCTGCTGCAAACAAATTCATCTCAATGAATGAACAAAAACTTGTCAAAGTTTGGTACTTAAAAACTCAGTGCAAGTTATTCAATCTTCCTGATCAAAATCAGACACAAGAAGCTATGCAAAAACAAGTAGTTGTAGCTTCTGCTCCAGTTAAAATCTTGGGATTTCTTAAGCCTGAAGGAATAGTTAGGTACATGAGAAACAACAACATTGAATCAATCATACACAAACATTTCATGACACATTGGGAAGGAAAAACAGAACTAAAAGTGTACCCTTTGGTGAAATCTTTTACAATTTCATTAGCCTTTCAATTTTTCTTAGGAATTGATGAATCTAATTATGTAGCTAAATTTGCAACAAAGTTTGAAAATTTGTATTATGGGATTTATTCAGTTCCTGTGAACTTTCCTGGCTCAAGATATCATAAAGCAATGAAGGGTGCATCTGAAATTAGGAAAGAGATTCAGCTTTTGATTAATGACAAGATTGATGGTTTATCTAAGGGGAAAATTATGGATGATTTATTAGCACATATTGTTGATGCTGAGAAGAGTGGAAAATATGTGCCTAAAATTGAAATAAGTAATATCATCATGGGGTTGATCAATTCTAGCTATATCTCAATAGCTATCACTTTGGCTTTCATGATCAAACACATTGGAATGAGACCTCATATCTACCAAAGAATCTTATCAGAGCATGGTGAAATTGTAAGATCAAAAGGAAGTGGTACAGTGCTAGATTGGGAGAGCATACAGAAGCTAAAATATACATGGGCTGTTGCACAGGAGACCATGAGACTCTACCCAGCAGCAGCAGGAGCATTCAGAGAGGCTAAAACAGATATCAACTATGAAGGTTTTACCATTCCAAAGGGATGGAAGATATTTTGGGCATTTATTGGAACAAATAAGAATCACAAGTACTTTGATGAACCTGAAAATTTTGATCCATCAAGGTTTGAAGGGAATGTTCCAGCACCATACACTTATATACCCTTTGGAGCAGGACCAAGATGTTGTCCTGGAAAGGACTACACTCGATTTGTGATTATCACTTTCATTCACAATCTTGTAACAAACTTCAAATGGGAAGTTATATTTCCAGATGAGAAAGTATCTGGTGCTTTGGTGCCTATCCCAGCTAAGGGAATTCCTATCCGTCTTCATCACTTGTAA 1431 0.348 MDTFMQSLLLILITLIASIYVFHKTKQSTIKNLPHGTFGWPIVGETYQFLFQKIENFLQVRVKKYSSKIFKTKLFGESTVVMFGPAANKFISMNEQKLVKVWYLKTQCKLFNLPDQNQTQEAMQKQVVVASAPVKILGFLKPEGIVRYMRNNNIESIIHKHFMTHWEGKTELKVYPLVKSFTISLAFQFFLGIDESNYVAKFATKFENLYYGIYSVPVNFPGSRYHKAMKGASEIRKEIQLLINDKIDGLSKGKIMDDLLAHIVDAEKSGKYVPKIEISNIIMGLINSSYISIAITLAFMIKHIGMRPHIYQRILSEHGEIVRSKGSGTVLDWESIQKLKYTWAVAQETMRLYPAAAGAFREAKTDINYEGFTIPKGWKIFWAFIGTNKNHKYFDEPENFDPSRFEGNVPAPYTYIPFGAGPRCCPGKDYTRFVIITFIHNLVTNFKWEVIFPDEKVSGALVPIPAKGIPIRLHHL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04813 476 FunFam Taxadiene 5-alpha hydroxylase 24 476 - -
Trre8g04813 476 Pfam Cytochrome P450 34 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04813 476 CDD CYP90-like 61 475 - -
Trre8g04813 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Trre8g04813 476 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04813 476 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04813 476 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04813 476 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04813 476 SUPERFAMILY Cytochrome P450 31 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04813 476 PANTHER CYTOCHROME P450 26 32 458 - -
Trre8g04813 476 Gene3D Cytochrome P450 22 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04813 Trre-Chr8 51479285 51481344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04813 32 380 Cytochrome P450 AT5G36110 34.358 3.70e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04813 K20667 - tpra:123917065 900.197