Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04808 ATGGCTTTGGGAAGAGGTAGTGCATTGGTTCTACTAGTCTGTTTTTTTGTGCTTCACTCTGAGTTGGCTCATGCTGTTACCTACACTGTTGGAGGTGCTGGTGGGTGGACCTTTAACACTGTTGGGTGGCCTCAAGGAAAACGCTTTAGGGCTGGTGACACACTTGTGTTCAACTATAGCCCTCGGGCACACAATGTGGTAGCGGTGAACAAAGGAGGGTATGATAGCTGCAAGACACCAGCAGGATCAAAAGTGTTTCGATCAGGAAAAGATCAAATCAGACTTGCTAGAGGACAAAACTACTTCATTTGCAATTTTGTCGGTCATTGCGAGTCTGGAATGAAAATTGCCATCAATGCTGCCTGA 366 0.4617 MALGRGSALVLLVCFFVLHSELAHAVTYTVGGAGGWTFNTVGWPQGKRFRAGDTLVFNYSPRAHNVVAVNKGGYDSCKTPAGSKVFRSGKDQIRLARGQNYFICNFVGHCESGMKIAINAA 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04808 121 Pfam Plastocyanin-like domain 36 114 IPR003245 GO:0009055
Trre8g04808 121 PANTHER BLUE COPPER PROTEIN 25 119 IPR039391 GO:0009055
Trre8g04808 121 SUPERFAMILY Cupredoxins 27 120 IPR008972 -
Trre8g04808 121 FunFam basic blue protein-like 26 120 - -
Trre8g04808 121 Gene3D - 26 120 IPR008972 -
Trre8g04808 121 CDD Plantacyanin 27 120 IPR041844 -
Trre8g04808 121 ProSiteProfiles Phytocyanin domain profile. 26 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04808 Trre-Chr8 51435995 51437599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04808 8 120 Phytocyanin Superfamily AT1G17800 37.815 3.95e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04808 - - gmx:100305948 215.312