Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04796 ATGGCTAGGTATGTCTTCCAACAACTAATTTCAGGGGTTAGTCATTGTCATGACATGGAAATTTGTCACCGAGATTTAAAGTTGGAGAACACATTATTAGACGGAAAGCGTATTAAGATTTGTGATTTTGGCTTTTCTAAGTCGTATCTATTACATTCAACGCCAAAATCAAGGATCGGAACTCCTTCCTATATTGCACCAGAGATTTTTTCTGGTAAAGAATACAATGGAAAGTTAGCAGATATATGGTCATGTGGAGTGATGTTGTATATAATGCTAGTGGGAGAATTGCCATTTGGGGACCAAAAGGATTTGCAAAATCTCAAGAAAACAATGAGTAAAATTATGCTTGTTCAATACAAGATCCCGGACACCGTTCACATTTCTCAACATTGTAGAAATCTAATATCTCGTATTTTTGTGGCAAATCCAATGAAAAGAATCAGCATGAGAGAAATTAAGTCCCATCCATGGTTTTTAGAGAACTTGCCTAAGGAATCAATAAAAGAGGCTCAAGAAGTGAACTACATAAAAGAAAATATTCCAACATCTTGTCTTCAAAGTATAGAAGAGATAATGAACATTGTTGAGGAAGCTAAAATTCTAGCTACAACTTCTAGTTCAGATCAATTGGATGATTTAACTGAGGCATTAAAGAAGATGTAA 666 0.3483 MARYVFQQLISGVSHCHDMEICHRDLKLENTLLDGKRIKICDFGFSKSYLLHSTPKSRIGTPSYIAPEIFSGKEYNGKLADIWSCGVMLYIMLVGELPFGDQKDLQNLKKTMSKIMLVQYKIPDTVHISQHCRNLISRIFVANPMKRISMREIKSHPWFLENLPKESIKEAQEVNYIKENIPTSCLQSIEEIMNIVEEAKILATTSSSDQLDDLTEALKKM 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04796 221 Pfam Protein kinase domain 3 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04796 221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Trre8g04796 221 SMART serkin_6 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04796 221 Gene3D Transferase(Phosphotransferase) domain 1 1 220 - -
Trre8g04796 221 FunFam Serine/threonine-protein kinase SRK2A 1 167 - -
Trre8g04796 221 PANTHER SERINE/THREONINE KINASE 2 191 - -
Trre8g04796 221 SUPERFAMILY Protein kinase-like (PK-like) 2 176 IPR011009 -
Trre8g04796 221 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04796 Trre-Chr8 51328258 51329760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04796 2 181 CBL-interacting serine-threonine protein kinases AT1G48260 41.489 4.00e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Trre8g04796 Pkinase 7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04796 K14498 - cit:102609931 299.286