Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04795 ATGGAGAAGTATGAGGAAGTGAAAGATATTGGAGATGGGAATTATGCAGTTGTGAAACTTATTCACCACATAGACACAAAATCCTTGTTTGCTGTCAAGTACATCCCAAGAGGCCACACGGTTGATGAAAGGGTGGCAAGGGAAATCATAAACCATAGATCACTTCATCATCCAAACATTATTCAATTCAAGGAGGTTTTTCTGACTCCCAACACATATTGCAATAGTTATGGAGTATGCAGCTGGTGGTGA 252 0.4008 MEKYEEVKDIGDGNYAVVKLIHHIDTKSLFAVKYIPRGHTVDERVAREIINHRSLHHPNIIQFKEVFLTPNTYCNSYGVCSWW 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04795 83 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Trre8g04795 83 Pfam Protein kinase domain 4 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04795 83 Gene3D Phosphorylase Kinase; domain 1 1 75 - -
Trre8g04795 83 ProSiteProfiles Protein kinase domain profile. 4 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04795 83 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 4 73 - -
Trre8g04795 83 SUPERFAMILY Protein kinase-like (PK-like) 2 74 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04795 Trre-Chr8 51327728 51328214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04795 3 69 Miscellaneous Gene Families AT3G23000 40.278 2.82e-09 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Trre8g04795 Pkinase 3.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04795 K14498 - gmx:100812259 108.227