Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre8g04789 | ATGGATCAATGTCAAAGTAGTGGTTGTGACATTCCACAAAAGTCTCAAAACAAGGACAATGAATGTCTTAACAAAGAAACAGTTTTCTTACATGGCGACTTAGATTTATTAATCATAGAAGCTAAATCTCTTCCGAATCTTGATTTATCAACCGAAGCAATTAGAAGATGTATAACTATGGGAAACAGTTGCACACCGCCTTTTGTAAAAGGACTCAAAACACACTCGGGTAAAGACAAGATCATAACAAGTGATCCTTATGTATCTGTTTGTCTAGCTGGTGCAACCATAGCACAAACTCGAGTAATTCCAAATTGCGAAAACCCTTTATGGGATGAACATTTTGTTGTTCCTGTTGCTCATCCTGTTCAAAAAGTTGAGTTTCTAGTAAAAGATAATGATATTCTTGGTGCGGAACTCATTGGTGTCGTGGATATACCTGCTCAAAAGTTACTATCTGGTGAGACTATTAATGATTGGTTTCCGATTATAGGTCAATATGGAAATTGTTTAAAGCCTTATCCTGAGTTGCATATTACTATTCAATTTAAGGCGATTGATACCCTTAAAGAGGATTACGAAAGTGTTAATTTAGGTGTTCCTGGTACATATTTTCCGCTTAGGAAAGGAGGGAATGTTACTCTTTATCAAGATGCACATGTACCGGACGGTATGTTACCTGATATTGAACTTGAAGATGGAAAAATGTATCAACATAGTAAATGTTGGGAGGATATTTGTCACGCGATTTTAGAAGCTCATCATTTGATATATATTATCGGATGGTCGGTTTTTCACCCTGTGAAGCTTGTTAGAGAACCGACAAAACCTTTGCCTTCTGGTGGAGAGCTTACACTTGGAGAGCTTTTGAAATACAAGTCACAAGAAGGACTAAGAGTTGTTATGCTTATTTGGGATGATAGAACTTCACATGACAAGTTTCTTTTGAAAACAGATGGTGTGATGCAGACTCATGATGAAGAAACTAAAAAGTTTTTTAAACATTCAACTGTTCATTGTGTGTTATCTCCGCGCTATGCAAGCAATAAACTCAGTATTTTCAAGCAACAGGTGGTGGGAACACTCTTTACGCATCACCAGAAATGTGTGCTTCTAGACACTCAAGGTTCTGGGAATAATCGAAAAATAACAGCTTTTATCGGTGGTCTTGATCTGTGTGATGGAAGATATGATACTCCTGAGCATAGACTTTTTCGTGATATTGATTCAGTCTTTCATAATGATTTTCATAATCCTACATTTCAATTAAATTCTAATTCTTTTGCACCAAGACAACCATGGCATGACTTACATTGCAAAATTGAAGGTCCAGCTGCATATGATATATTAACCAATTTTGAACAAAGATCACGGAAGGCAAAAAAATGGCGCGATTTCAGGCTTAGAAAGGTGACAAATTGGCATGATGATGCTTTACTAAGGCTAGATCGTATTTCATGGATTGTAAAACCATCTTCTGGTCCAGAAGGCGATAAATCTGTTCGTGTAACCGAAGACGCTGATCCTGAGAGTTGGCATGTACAGATATTTCGGTCCATAGATTCAGGATCTGTGAAGGGATTTCCAAAGGATTTTGATAAGGCAAAAGCTCAGAATCTTTTATGTGGAAAAAATTTAAAAGTTGATCAAAGCATCCATGCTGCTTATGTAAAAGCAATAAGATCCGCGGAGCGCTTCATTTATATTGAGAATCAGTATTTTCTTGGCTCCTCGTACCATTGGCCTTCATATAAGAATGCAGGTGCAAATCACTTGGTTCCGATGGAGTTGGCTTTAAAAATTGCGAACAAGATAAGCAAGAATGAACGCTTTTGTGTGTATATAGTTATACCAATGTGGCCGGAAGGAGTTCCAACTAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAAGGACAAACAATGTCTATGATGTACAAGATTATTGCAGATGCACTTGAAAAAGCAGGTCTCTCTGAATGTTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAAAGAGAACCTCAATCGCACCAAAGTCAATCACCAATAAATCAATCATCTGAAAACCGCGCCTTGGTAGCAGTTAAAAAATACCGGCGTTTTATGATTTATGTTCATGCGAAAGGAATGATAGTTGATGATGGATATGTAATCATCGGATCAGCAAATATTAATCAGAGATCATTAGATGGATCAAGAGACACAGAAATAGCCATGGGGGCTTATCAACCAAAACATACATTGGCACAAAAGAACACTCTTCCACGCGGCCAGGTGTACGGATACCGAATGTCACTTTGGGCCGAGCACCTTGGTGGTATTGATGACACGATTACTAAACCTCACACGTTGGAATGTGTTAGACATGTTAATAGAATGGCTAGGAAAAATTGGAGCATATACGTATCTGAGGAAGGACAACAAATGATGGGAACCTTGATGCAATATCCGGTTCATGTTAGCAGAAATGGAAAAGTTAGTTCATTACAAGGTCATGAGTCTTTTCCTGATGTTGGTGGCAAAATTCTTGGAGCACATAACTCACTTCCAGATGCACTAACCACATGA | 2577 | 0.3803 | MDQCQSSGCDIPQKSQNKDNECLNKETVFLHGDLDLLIIEAKSLPNLDLSTEAIRRCITMGNSCTPPFVKGLKTHSGKDKIITSDPYVSVCLAGATIAQTRVIPNCENPLWDEHFVVPVAHPVQKVEFLVKDNDILGAELIGVVDIPAQKLLSGETINDWFPIIGQYGNCLKPYPELHITIQFKAIDTLKEDYESVNLGVPGTYFPLRKGGNVTLYQDAHVPDGMLPDIELEDGKMYQHSKCWEDICHAILEAHHLIYIIGWSVFHPVKLVREPTKPLPSGGELTLGELLKYKSQEGLRVVMLIWDDRTSHDKFLLKTDGVMQTHDEETKKFFKHSTVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCVLLDTQGSGNNRKITAFIGGLDLCDGRYDTPEHRLFRDIDSVFHNDFHNPTFQLNSNSFAPRQPWHDLHCKIEGPAAYDILTNFEQRSRKAKKWRDFRLRKVTNWHDDALLRLDRISWIVKPSSGPEGDKSVRVTEDADPESWHVQIFRSIDSGSVKGFPKDFDKAKAQNLLCGKNLKVDQSIHAAYVKAIRSAERFIYIENQYFLGSSYHWPSYKNAGANHLVPMELALKIANKISKNERFCVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIIADALEKAGLSECYHPQDYLNFYCLGKREPQSHQSQSPINQSSENRALVAVKKYRRFMIYVHAKGMIVDDGYVIIGSANINQRSLDGSRDTEIAMGAYQPKHTLAQKNTLPRGQVYGYRMSLWAEHLGGIDDTITKPHTLECVRHVNRMARKNWSIYVSEEGQQMMGTLMQYPVHVSRNGKVSSLQGHESFPDVGGKILGAHNSLPDALTT | 858 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre8g04789 | 858 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 361 | 396 | IPR001736 | GO:0003824 | |
| Trre8g04789 | 858 | PIRSF | PLD_plant | 19 | 858 | IPR011402 | GO:0004630|GO:0005509|GO:0016020|GO:0046470 | |
| Trre8g04789 | 858 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 704 | 731 | IPR001736 | GO:0003824 | |
| Trre8g04789 | 858 | SMART | pld_4 | 361 | 396 | IPR001736 | GO:0003824 | |
| Trre8g04789 | 858 | SMART | pld_4 | 704 | 731 | IPR001736 | GO:0003824 | |
| Trre8g04789 | 858 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 30 | 184 | IPR035892 | - | |
| Trre8g04789 | 858 | CDD | C2_plant_PLD | 27 | 183 | - | - | |
| Trre8g04789 | 858 | PANTHER | PHOSPHOLIPASE D | 25 | 847 | IPR015679 | - | |
| Trre8g04789 | 858 | Pfam | Phospholipase D Active site motif | 362 | 396 | IPR001736 | GO:0003824 | |
| Trre8g04789 | 858 | Pfam | PLD-like domain | 622 | 740 | IPR025202 | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre8g04789 | K01115 | - | gmx:100810824 | 1486.09 |
Showing 1 to 1 of 1 entries