Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04785 ATGGGTAAAAAGAGCAAGAGCTTTTTCTCCTTTCGCCGTCGCTCCAAAAAACTACCACCACCACAGCCTCCGCCATCTACGCTCGAAATCACCGGTTCACCGTCGGAAAATCCATTAGTCCTTAAACCGAAGAAAAAAACCGGCGGAGCCAAATTATGGATGCGTTTCGACCGCTCCGGCAAGTCAGAGCTTGTCGAGTGGGAGAAAAACACGATCATCCGCCACGCCGCTATTCCCGCCAGAGACCTAAGGATTCTAGGTCCTGTCTTCTCTCATTCCTCCAATATCCTCGCGAGAGAGAAAGCAATGGTGGTGAATTTGGAATTTATTAAAGCAATAGTAACAGCTGAAGAAGTTTTATTGCTTGATCCATTAAGACAAGAGGTTCTTCCATTTGTTGAACAATTGAGGCAACAACTTCCACATAAGACTCAACCTAAGCTTCTTGGTGGTGGTGATGATAATGTGACTGAAACTGCTGAAGGTTTACAATCCGAACTTCCGCTTCCGTTCGAGTTTCAAGTGTTGGAAATTGCTTTGGAAGTTGTTTGTACTTATTTGGATTCAGATGTTGCTGACCTTGAAAGAGGTGCTTATCCTATATTGGATGAATTGGCTAGGAATGTTAGTACTAAGAATCTTGAACATGTTAGAAGCTTGAAGAGTAATCTTACTCGATTGCTCGCACGCGTGCAGAAGGTACGCGATGAAATTGAACATCTATTAGATGACAATGAAGACATGGCTCAACTATATTTGACAAGGAAGTGGTTGCAAAACCAACAAGTTGAGGCTCATTTGGCAGCCACAACCCCGAATAACCTTTCAGTTGTTCGACGGCTTAATTCTACCAGAAGTGGAAGTCTTGTGACTAGCAATGATGATAATGATGTGGAGGACTTGGAGATGTTGCTTGAAGCATACTTTATGCAATTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAGTATATTGATGACACTGAAGATTATGTCAACATCCAACTTGATAACCACAGGAATGAACTTATCCAACTGCAGTTGACATTGACCATTGCATCATTTGCTATTGCTATTGAGACTTTGATAGCCGGTGCATTTGGTATGAACATTCCATGTACATTATACAACACAAAAGGAATATTTTGGCATGCTGTTGGGATTATGACTGCAGTTTCCATAGTGATTTTCGTGCTTGTTTTAGCGTATGCTAAATGGAAAAAGTTGTTAGGTTCGTAA 1242 0.4171 MGKKSKSFFSFRRRSKKLPPPQPPPSTLEITGSPSENPLVLKPKKKTGGAKLWMRFDRSGKSELVEWEKNTIIRHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPHKTQPKLLGGGDDNVTETAEGLQSELPLPFEFQVLEIALEVVCTYLDSDVADLERGAYPILDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQVEAHLAATTPNNLSVVRRLNSTRSGSLVTSNDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPCTLYNTKGIFWHAVGIMTAVSIVIFVLVLAYAKWKKLLGS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04785 413 CDD Mrs2_Mfm1p-like 53 410 IPR039204 -
Trre8g04785 413 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 40 411 IPR039204 -
Trre8g04785 413 FunFam magnesium transporter MRS2-4 128 344 - -
Trre8g04785 413 MobiDBLite consensus disorder prediction 1 42 - -
Trre8g04785 413 Pfam CorA-like Mg2+ transporter protein 289 401 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre8g04785 413 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 349 400 IPR045863 -
Trre8g04785 413 Coils Coil 217 251 - -
Trre8g04785 413 Gene3D Magnesium transport protein CorA, transmembrane region 351 410 - -
Trre8g04785 413 Gene3D - 41 124 - -
Trre8g04785 413 Gene3D Magnesium transport protein CorA, transmembrane region 126 344 - -
Trre8g04785 413 FunFam Magnesium transporter MRS2-1 41 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04785 Trre-Chr8 51259231 51261895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04785 42 413 MRS2 Gene Family AT3G58970 71.948 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04785 K16075 - gmx:100812561 603.208