Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04784 ATGGCAAATTCAAAGAGCTCATCGGGTATTAGAAATTTGGTGTATACTGGTCCTGGAAAGCATGCTCATGCTCTGCTTCCTCCCAAAAGCCCATTTCCTACTATTTCTCAAGCATATGCTGATTATGTCTCAAATCCTACAATTGGTTCAAAGCCTGTTAATAAGCCAAGAGAAGGAAACTCTCACCACCAACGTACTTCATCTGAGAGCCATCTTATTGAGGAGCAGCCATCATGGCTTGATGATCTACTAAATGAGCCAGATACACCTGTCAGAAGGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATATATCGATACTATTAATGCATCTAACATCGGTTATGCCGATCATGATGAGTATAAATATAAGAATGTCTTATCTATTCCGGCTTGGTCACCTCCAGACTTTGATCGCAACAAAGATGCTCGTCATGCATCCATGTATGCAGAAATGAATCTAGCAAAACAAAAAAACAGATCATGGGACTCTTTTTCAAATGTGAGTGGTGTTCCATCAGGTAGAGACAGTGTTGCTTTTCAGAGATCAGGATCACCAAGCCCAAGTACACTATACGAAGCAGATCGGATCCTACCAACTGCTAATGAAAATCATGATTCAATAGAATCTGGCTTACAAGACATAAAATCATCTTTTGAAAGAAAGGACGGTTTACATGCAAAGTCGCTTGCTTCTGAAACAGATTCAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTTCGTAAACTTCAGTACATAGCCGAGCTGGAAAGAAACGTACAGGCTTTACAGGCAGAAGGAACTGAAGTATCGGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAAGAACAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAGAGAGAGATCGGAAGATTACGTAGCATGTATCAACAAAATCTGCAGCAGTCACAACAGCCTCAACAACAACCATCTGGTAGTCATAGACGCTCGAACAGCAGAGACCTTGACTCTCAGTTTGCTAACCTTTCTCTGAAGCACAAGGACACCAATTCTGGGCACGACCCTGCAAATGGAGCACTAAGAATTTAG 1143 0.4156 MANSKSSSGIRNLVYTGPGKHAHALLPPKSPFPTISQAYADYVSNPTIGSKPVNKPREGNSHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRRGGHRRSSSDSFAYIDTINASNIGYADHDEYKYKNVLSIPAWSPPDFDRNKDARHASMYAEMNLAKQKNRSWDSFSNVSGVPSGRDSVAFQRSGSPSPSTLYEADRILPTANENHDSIESGLQDIKSSFERKDGLHAKSLASETDSKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGTEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRSMYQQNLQQSQQPQQQPSGSHRRSNSRDLDSQFANLSLKHKDTNSGHDPANGALRI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04784 380 MobiDBLite consensus disorder prediction 43 74 - -
Trre8g04784 380 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 22 362 IPR044797 -
Trre8g04784 380 MobiDBLite consensus disorder prediction 328 346 - -
Trre8g04784 380 Gene3D - 239 290 - -
Trre8g04784 380 SUPERFAMILY Leucine zipper domain 246 288 IPR046347 GO:0003700|GO:0006355
Trre8g04784 380 MobiDBLite consensus disorder prediction 1 29 - -
Trre8g04784 380 Coils Coil 250 305 - -
Trre8g04784 380 MobiDBLite consensus disorder prediction 328 380 - -
Trre8g04784 380 CDD bZIP_plant_RF2 239 285 IPR044759 GO:0003700|GO:0006355
Trre8g04784 380 MobiDBLite consensus disorder prediction 56 70 - -
Trre8g04784 380 SMART brlzneu 235 294 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04784 Trre-Chr8 51251950 51254369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04784 24 309 bZIP Transcription Factor Family AT2G42380 30.097 1.15e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04784 - - cam:101495568 660.218