Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04783 ATGGCAAATTCAAAGAGCTCATCGGGTATTAGAAATTTGGTGTATACTGGTCCTGGAAAGCATGCTCATGCTCTGCTTCCTCCCAAAAGCCCATTTCCTACTATTTCTCAAGCATATGCTGATTATGTCTCAAATCCTACAATTGGTTCAAAGCCTGTTAATAAGCCAAGAGAAGGAAACTCTCACCACCAACGTACTTCATCTGAGAGCCATCTTATTGAGGAGCAGCCATCATGGCTTGATGATCTACTAAATGAGCCAGATACACCTGTCAGAAGGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATATATCGATACTATTAATGCATCTAACATCGGTTATGCCGATCATGATGAGTATAAATATAAGAATGTCTTATCTATTCCGGCTTGGTCACCTCCAGACTTTGATCGCAACAAAGATGCTCGTCATGCATCCATGTATGCAGAAATGAATCTAGCAAAACAAAAAAACAGATCATGGGACTCTTTTTCAAATGTGAGTGGTGTTCCATCAGGTAGAGACAGTGTTGCTTTTCAGAGATCAGGATCACCAAGCCCAAGTACACTATACGAAGCAGATCGGATCCTACCAACTGCTAATGAAAATCATGATTCAATAGAATCTGGCTTACAAGACATAAAATCATCTTTTGAAAGAAAGGACGGTTTACATGCAAAGTCGCTTGCTTCTGAAACAGATTCAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTTCGTAAACTTCAGTACATAGCCGAGCTGGAAAGAAACGCAGAAGGAACTGAAGTATCGGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAAGAACAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAGAGAGAGATCGGAAGATTACGTAGCATGTATCAACAAAATCTGCAGCAGTCACAACAGCCTCAACAACAACCATCTGGTAGTCATAGACGCTCGAACAGCAGAGACCTTGACTCTCAGTTTGCTAACCTTTCTCTGAAGCACAAGGACACCAATTCTGGGCACGACCCTGCAAATGGAGCACTAAGAATTTAG 1128 0.4149 MANSKSSSGIRNLVYTGPGKHAHALLPPKSPFPTISQAYADYVSNPTIGSKPVNKPREGNSHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRRGGHRRSSSDSFAYIDTINASNIGYADHDEYKYKNVLSIPAWSPPDFDRNKDARHASMYAEMNLAKQKNRSWDSFSNVSGVPSGRDSVAFQRSGSPSPSTLYEADRILPTANENHDSIESGLQDIKSSFERKDGLHAKSLASETDSKRAKQQFAQRSRVRKLQYIAELERNAEGTEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRSMYQQNLQQSQQPQQQPSGSHRRSNSRDLDSQFANLSLKHKDTNSGHDPANGALRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04783 375 MobiDBLite consensus disorder prediction 43 74 - -
Trre8g04783 375 Coils Coil 374 375 - -
Trre8g04783 375 MobiDBLite consensus disorder prediction 323 375 - -
Trre8g04783 375 Coils Coil 273 300 - -
Trre8g04783 375 MobiDBLite consensus disorder prediction 1 29 - -
Trre8g04783 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 22 357 IPR044797 -
Trre8g04783 375 MobiDBLite consensus disorder prediction 56 70 - -
Trre8g04783 375 MobiDBLite consensus disorder prediction 323 341 - -
Trre8g04783 375 CDD bZIP_plant_RF2 239 280 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04783 Trre-Chr8 51251950 51254369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04783 24 304 bZIP Transcription Factor Family AT2G42380 29.126 1.73e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04783 - - cam:101495568 647.506