Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04772 ATGAAGAAATATGATTCAAAGGTTTTCAAGACATCATTGTTTGGAGAGAATATTGCTGTGTTTTGTGGACCAACAGGGAACAAGTTTTTGTTTAGTAATGAGAACAAGAATGTTCAAGTATGGTGGCCTAGTACAGTGAAGAATTTGTTAAGGTTGTCTATTGTTAATAAGGTTGGTGATGAAGCAAAGATAACTAGAAGGTTGCTTATGAGCTTTCTTAATCCAGAAACACTCAGAAATTATTTGCCAAAAATGGATAAGGTTGCTCAGCACCATATAAACACACATTGGAAAGGGAAGGATCAAGTTGTTGTCTATCCCATAATACAGCTATACACATTTGAATTAGCTTGTTGCTTATTTTTAAGCATGGAAGATCCTATCCATGTAACAAAATTTTCATCACATTTTGAAGAATTTCTAAAAGGGATCATTGGTTTCTCCATTAACATTCCTGGAACAAGGTTTCATAAGGCAATGAAAGCTGCAGATGAAATAAGAAAAGAAATTAGAATAATTATGAAGAAAAGGAAAGTGGATTTGGAAGAAAAAAAGACATCACCTACACAAGACCTTTTATCACATTTACTTGTTACACCTGACACAAGTGGAAGGTTTTTGAGTGAAGCCGAGATTATCGATAACATACTACTACTTCTTTTTGCTGGCCATGACACTTCTAGATCAGTGTTATCATCTGTAATGAAGTATCTTGGAAATTTGCCTGAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGTAGGGGAGTTATTGCAATGGGAGGATGTTCAAAAAATGAAATACTCGTGGAATGTTGCATCTGAAGTTATGAGGCTGTCACCGCCCGTCGGTGGCGCTTTCCGAAATGCTATAAAGGATGTCACCTATGCTGATTATAACATCCCTAATGGATGGAAGTTGCATTGGAATGTTCATACAACACAAATGGATCCAACACTGTTTCCAAATCCTGAAAAATTTGATGCTTCAAGATTTGAAGGAGAAGGACCAATACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGACAAGAGTTTGCTCGGTTAGAGATACTTGTGTTTATGCATAATATTGTGAAATGTTTCAAGTGGGATTTAGTTAATCCTGATGAGAAGTTCAAGTATGATCCTATGCTAGAGCCTGAAAATGGACTTCCAATTCAACTTCAACCTTCTCATTATACATAA 1242 0.3599 MKKYDSKVFKTSLFGENIAVFCGPTGNKFLFSNENKNVQVWWPSTVKNLLRLSIVNKVGDEAKITRRLLMSFLNPETLRNYLPKMDKVAQHHINTHWKGKDQVVVYPIIQLYTFELACCLFLSMEDPIHVTKFSSHFEEFLKGIIGFSINIPGTRFHKAMKAADEIRKEIRIIMKKRKVDLEEKKTSPTQDLLSHLLVTPDTSGRFLSEAEIIDNILLLLFAGHDTSRSVLSSVMKYLGNLPEVYEQVLKEQLEISQGKEVGELLQWEDVQKMKYSWNVASEVMRLSPPVGGAFRNAIKDVTYADYNIPNGWKLHWNVHTTQMDPTLFPNPEKFDASRFEGEGPIPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKCFKWDLVNPDEKFKYDPMLEPENGLPIQLQPSHYT 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04772 413 PRINTS P450 superfamily signature 278 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 PRINTS P450 superfamily signature 222 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 PRINTS P450 superfamily signature 350 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 352 361 IPR017972 GO:0005506|GO:0016705
Trre8g04772 413 Pfam Cytochrome P450 2 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 PANTHER CYTOCHROME P450 26 7 395 - -
Trre8g04772 413 SUPERFAMILY Cytochrome P450 2 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 Gene3D Cytochrome P450 1 410 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 CDD CYP90-like 1 409 - -
Trre8g04772 413 FunFam Taxadiene 5-alpha hydroxylase 1 410 - -
Trre8g04772 413 PRINTS E-class P450 group I signature 317 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 PRINTS E-class P450 group I signature 359 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 PRINTS E-class P450 group I signature 211 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04772 413 PRINTS E-class P450 group I signature 349 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04772 Trre-Chr8 51089514 51093652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04772 8 315 Cytochrome P450 AT5G36110 44.481 1.30e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04772 - - gmx:100778750 681.789