Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04707 ATGATGCTATCTAAGATCTTCTTTGCTTTCTCAATCATTGCATTCACCTGTTTCAATTCTTTAGATTATGCAGAATCTAAACTTCCCCAGCTAGAGATTGATGCTCTTGAAGAAATCACTAGCACAATGGGTGCAACCTATTGGAAATTTGATGGTGATTCATGTCAAATTAAAATGTTTGGTTTAACTCAAAATTCACCTGATGGATCTGAAAGTAATATTGACTGTGATTGCTCTTCTGTAAATGACACCTTTTGTCACGTAGTAAGGATTATATTCAAGGGGTACAATCTTCCCGGCACACTTCCGCCTCAATTGGTTAAGCTTCCGTACCTCAAAGAAATTGATTTTGCTTTGAACTACCTAAATGGTACGATTCCGAAGGAATGGGCTTCGATTGAACTAACTTCAATTTCGCTACTTGTTAATCGTTTATCAGGGGAGATTCCTAAGGAGTTGGGAAACATTACCACTCTAACATACCTGAACCTCGAAGCAAACCAATTTGTCGGTCTTGTTCCCTCTGAACTTGGAAGTTTATCTAACCTGCAGAGTTTGATTCTATCATCCAATAAATTGTCTGGGAACTTACCAGTGGCATTTGCTAAGTTACATAACTTGACAGATTTTAGGATAAATGATAATAATTTCAATGGAAAAATACCTAGCTTCATACCGAATTGGCAACAGCTTCAAAGACTAGAAATGCATGCAAGTGGACTGGAGGGACCTATCCCGTCAACGATATCTCTTTTGACTAATTTATCTCAATTGAGGATTAGTGACATAAATGGTCCAAGTCAGGATTTTCCTATTTTAAGCAACATGTCCGGAATGATAAGAGTGATTTTGAGGAATTGCAATATTACTGGAAAGATTCCTAGCTATTTCTGGACAATGAAGAGTTTGGAAATGTTGGATCTAAGTTTCAATAATTTGTTTGGGGAAATACCGGCCATGGTACATGTAAGACATCTGAGATTTGTATTCCTAACTGGCAACAAGCTAAGTGGTAATGTACCTGACTCAATCTTGATGGATGGAAGCAATGTCGATCTTTCTTACAACAACTTTACATGGCAAGGACCTGGGAAACCTACATGTGGATCTTATCTGAATTTAAACCTAAACTTGTTCCGGAGCTCGTCAGGGACCAATGCATTACAAGGAGTTCTTCCATGTTCAGAAACTTTCACCTGTCCTAGATATTCAAGTTGTTTGCATGTTAATTGCGGTGGAAACAATATACAGGTGAGGGAAAATGGTAAAAATATCCTCTATATTGGAGATGGAGATGTAACGGGGGGTGTTGCTAAATCTTATATTGATGATGAAAATCATTGGGGTTTTAGTAGCACTGGGGACTTCATGGATGACGGTGATTCCCAAAATACACGTTACTCCAGGTCTTTGTCATCATCAAGTATGCTGTTGTCAGAAATATATACAACAGCTCGTGCTGCTCCCATTTCGCTTACTTATTTTCAGTATTGCTTGGAAAGTGGGAAATATACCGTTCATCTCCACTTTGCAGAAATACAATTTACAAACGATAAGACATATAGAAGTCTTGGGAAGCGCTTATTTGATATCTATGTTCAGGGAATATTAGTTTGGAAGGATTTTAATATTGAAGATGAATCACACCTTGCTCAAAAACCGCGTATATTATCAGCAAATAATGTCACTGTAACAGATGGTATTCTAGAGATTCGATTCTACTGGGCTGGCAAAGGGACTACAAGGATTCCTATTTCTGGAGTTTATGGTCCCCTTATATCAGCTTTCTCTATTGTTTCGGATTCTAAACCTTGTTCAGACCAAAAGAATGGAAGCCGTAATTTAGTAATTGGACTAGGATTTGGAGTTACAGCAGTGTGCCTAGTCCTTATTGTGGTAGGAATTTTTTGGAGGAAAGGCTACTTCAAGGGAATAAGTAGAAAAGAAAAAGTTTTCAAAGGGCAAGATTTTCAGATGAGGACATTTACCTTAAAACAAATCAGAGCCGCCACAGATGGATTCAGTCCTGCTAATAAGGTTGGGGAAGGCGGTTTTGGTCCTGTCTACAAGGGCCAATTATCTGATGGTACATGGGTAGCAGTCAAACAGCTCTCCTCGAAGTCTCGCCAAGGAAACCGTGAATTTTTAAACGAGATAGGCATGATATCTTGTTTTCAACATCCTAATCTTGTTAAACTTCATGGATGTTGCATTGAAGGGGATCAATTAATATTGGTGTATGAGTACATGGAAAATAATAGCCTGGCCCGTGCTTTATTCAGTTCAGAAAATCAGCTTAAACTTGATTGGCCATCAAGGCTTAGGATCTGCATTGGCATAGCAAAAGGTCTAGCATTTCTTCACGAAGAATCAAGACTCAAGGTCGTTCATCGAGATATCAAAGCTACTAATGTGTTACTGGATGGGAATTTAAACCCTAAAATATCTGATTTTGGGTTGGCTAGGCTTGATGAAGAGGAGAAGTCCCATATAATCACCCGAGTTGCAGGCACAATAGGATATATGGCACCGGAATATGCTTTATGGGGTTACTTGAGTTACAAGGCTGATGTTTACAGTTTTGGAGTTGTGGTCTTGGAAACTGTTAGTGGAAAGAGTAATAACAATTACATGCCAAGTGATAATTGTGTTTGCCTTCTAGATAAGGCATTATTTCTGGAACGGACTAAAAATGTTATGTCACTGGTTGATGAGAGGTTGGGATCAGAGATAAACACAACTGAAACAAAAAATTTAGTGAAAGTGGCTCTCTTGTGTATAAATTCATCGCCGTCACTTAGGCCTACAATGTCTGAGGTTGTAAACATGCTTGAGGGAAGAATAAGCGTTCCAGATGTTATCCCCGAAGGTAATACTCTCAGTGAAGATTTAAGGTTTAAATCCATGAGGGACATCCATCAAAACAGGGAAGGTCACAGTGCAAGCACAAGCCGTACCGACGGTTCAACAGGATTGCTTACACATAGCACTCCCTCAATACTTGGCAATGATACTCATGAGATATCCTCCGAACCATAA 3039 0.3896 MMLSKIFFAFSIIAFTCFNSLDYAESKLPQLEIDALEEITSTMGATYWKFDGDSCQIKMFGLTQNSPDGSESNIDCDCSSVNDTFCHVVRIIFKGYNLPGTLPPQLVKLPYLKEIDFALNYLNGTIPKEWASIELTSISLLVNRLSGEIPKELGNITTLTYLNLEANQFVGLVPSELGSLSNLQSLILSSNKLSGNLPVAFAKLHNLTDFRINDNNFNGKIPSFIPNWQQLQRLEMHASGLEGPIPSTISLLTNLSQLRISDINGPSQDFPILSNMSGMIRVILRNCNITGKIPSYFWTMKSLEMLDLSFNNLFGEIPAMVHVRHLRFVFLTGNKLSGNVPDSILMDGSNVDLSYNNFTWQGPGKPTCGSYLNLNLNLFRSSSGTNALQGVLPCSETFTCPRYSSCLHVNCGGNNIQVRENGKNILYIGDGDVTGGVAKSYIDDENHWGFSSTGDFMDDGDSQNTRYSRSLSSSSMLLSEIYTTARAAPISLTYFQYCLESGKYTVHLHFAEIQFTNDKTYRSLGKRLFDIYVQGILVWKDFNIEDESHLAQKPRILSANNVTVTDGILEIRFYWAGKGTTRIPISGVYGPLISAFSIVSDSKPCSDQKNGSRNLVIGLGFGVTAVCLVLIVVGIFWRKGYFKGISRKEKVFKGQDFQMRTFTLKQIRAATDGFSPANKVGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGMISCFQHPNLVKLHGCCIEGDQLILVYEYMENNSLARALFSSENQLKLDWPSRLRICIGIAKGLAFLHEESRLKVVHRDIKATNVLLDGNLNPKISDFGLARLDEEEKSHIITRVAGTIGYMAPEYALWGYLSYKADVYSFGVVVLETVSGKSNNNYMPSDNCVCLLDKALFLERTKNVMSLVDERLGSEINTTETKNLVKVALLCINSSPSLRPTMSEVVNMLEGRISVPDVIPEGNTLSEDLRFKSMRDIHQNREGHSASTSRTDGSTGLLTHSTPSILGNDTHEISSEP 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04707 1012 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 197 - -
Trre8g04707 1012 Gene3D Ribonuclease Inhibitor 197 273 IPR032675 -
Trre8g04707 1012 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 266 387 - -
Trre8g04707 1012 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Trre8g04707 1012 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 601 - -
Trre8g04707 1012 FunFam Putative LRR receptor-like serine/threonine-protein kinase 750 956 - -
Trre8g04707 1012 ProSiteProfiles Protein kinase domain profile. 674 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04707 1012 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 198 264 - -
Trre8g04707 1012 Gene3D Transferase(Phosphotransferase) domain 1 750 951 - -
Trre8g04707 1012 Pfam Protein tyrosine and serine/threonine kinase 678 944 IPR001245 GO:0004672|GO:0006468
Trre8g04707 1012 CDD STKc_IRAK 680 946 - -
Trre8g04707 1012 MobiDBLite consensus disorder prediction 981 1012 - -
Trre8g04707 1012 Gene3D - 404 603 - -
Trre8g04707 1012 SUPERFAMILY L domain-like 73 343 - -
Trre8g04707 1012 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 980 - -
Trre8g04707 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Trre8g04707 1012 Pfam Malectin domain 406 596 IPR021720 -
Trre8g04707 1012 Gene3D Ribonuclease Inhibitor 59 196 IPR032675 -
Trre8g04707 1012 SUPERFAMILY Protein kinase-like (PK-like) 656 945 IPR011009 -
Trre8g04707 1012 SMART serkin_6 674 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04707 1012 Gene3D Ribonuclease Inhibitor 274 350 IPR032675 -
Trre8g04707 1012 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 643 749 - -
Trre8g04707 1012 Gene3D Phosphorylase Kinase; domain 1 642 749 - -
Trre8g04707 1012 MobiDBLite consensus disorder prediction 974 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04707 Trre-Chr8 50699791 50710585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04707 8 839 Receptor kinase-like Gene Family AT1G29750 60.072 0.0 1021
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g04707 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04707 - - mtr:11406167 1711.04