Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04692 ATGATGAAGTGGGGTGGAAGAAAATCTTCTTCAGCTTCATCTTCTAAACATTCCTTCATCTCTCATGTATCTCCTTTTTCATGGCTATCAAAGTTCAAGCAAATGAAAATCAACTCAGACATAGAGGCAAAACCTGAGAAGCTGAAGCAGAACATCCCTTCTGAAAATAGTTCATCACAATTTCCTGAAAATAGAGGAAAGTTTTACGGAGGTGGAGATGACGATGCTTTCTGGAGATTATCATTTGGTGAAGAGGTTACTAATGAGCAAAAGAAGAAAAGTGAAGATAATATGAAGCAAGTAATGTACAATTTGGATACTAAAAGACATGGAAGAAGTAGAAGAAGAGAAGATAGAAAATTGCTGAATGAAACAAAGAGTGCAAAGGAACTTGAATACTTGAAGAGACGATATGAGAGAAAAGCACAAAGAGTTTTACAAGAGAAGCTCTTGAAATTAGAGAATGCAGCAGAGGAAGCTGAATTTGCATCAAGTAAATGTAAATTCTTAGAAAAAGATGAGCTTCAATTTGAATCACCAAGTACCTACTTATGTTCTTCTTCTGTAGATGCTGAAAGTTCTGACCTTGGCCTTGGAAGTATAAGAGAAAATGGTGTGAAACAAAGTGAGGAGTTTAAAGCAAAGAGTAACAAAAAAAGGGAATCAGTTCATGTGAGCAGAGAAATCCAGAGGAGGAAACCGAAGCACAGTTCCAAGGTAAGAGTACATTCTCCAAGGATGGCTGCAAAAGTTGAAATATGCAAAATAAAGGCGATACAAGACAAAAAGAAAGCAAAACTAAAGATGAAGAAAGAAGAAGAGGAAACAGAAGAAGGGTTAGATAGCTTTGCAGTTGTGAAGTGTTCTTTGGATCCACTACAAGATTTTAGAGATTCAATGATTGAGATGATCAAAGAGAAACAGATAAGTCAGCCAGAAGAAATGGAAGAGCTATTAGCATGTTATTTGAGTTTGAATTCTAATGAATATCATGATCTCATTATCACAGCTTTCCGGCAGTACCAAGTTGTTTGCACTCAAAGCATGGATGCTTATGTTGAAGTTAAGAACCTAGGATGCTAG 1083 0.3638 MMKWGGRKSSSASSSKHSFISHVSPFSWLSKFKQMKINSDIEAKPEKLKQNIPSENSSSQFPENRGKFYGGGDDDAFWRLSFGEEVTNEQKKKSEDNMKQVMYNLDTKRHGRSRRREDRKLLNETKSAKELEYLKRRYERKAQRVLQEKLLKLENAAEEAEFASSKCKFLEKDELQFESPSTYLCSSSVDAESSDLGLGSIRENGVKQSEEFKAKSNKKRESVHVSREIQRRKPKHSSKVRVHSPRMAAKVEICKIKAIQDKKKAKLKMKKEEEETEEGLDSFAVVKCSLDPLQDFRDSMIEMIKEKQISQPEEMEELLACYLSLNSNEYHDLIITAFRQYQVVCTQSMDAYVEVKNLGC 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04692 360 MobiDBLite consensus disorder prediction 41 72 - -
Trre8g04692 360 Coils Coil 128 173 - -
Trre8g04692 360 MobiDBLite consensus disorder prediction 1 20 - -
Trre8g04692 360 MobiDBLite consensus disorder prediction 88 122 - -
Trre8g04692 360 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 132 341 IPR038933 GO:0045892
Trre8g04692 360 Coils Coil 255 277 - -
Trre8g04692 360 MobiDBLite consensus disorder prediction 208 228 - -
Trre8g04692 360 NCBIfam uncharacterized plant-specific domain TIGR01568 284 341 IPR006458 -
Trre8g04692 360 MobiDBLite consensus disorder prediction 208 242 - -
Trre8g04692 360 ProSiteProfiles OVATE domain profile. 285 344 IPR006458 -
Trre8g04692 360 Pfam Transcriptional repressor, ovate 289 340 IPR006458 -
Trre8g04692 360 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04692 Trre-Chr8 50596663 50597948 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre8g04692 Ovate 1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04692 - - tpra:123914565 555.444