Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04687 ATGGGGAGCCAAGATGTGATGTTTGTGAGTTTTTGGGCGAGTCCAAATGCTAAGAGGGTTGAGTGGGCATTGAAAATAAAGGGTGTTGATTATGAGTATGTAGAAGAAGACATCTTCAACAAAAGTAGTCTCCTTTTGGAACTGAACCCGGTTCATAAGATGGTTCCGGTTCTTGTCCACGCCCATAAACCAATTGTAGAGTCATTCGTTATCCTTGAATACATCGATGAAACATGGAGGCAGACTCCACTTTTGCCTCACCATCCTTATCAAAGAGCTCTTGCTCGCTTTTGGGCAAATTTTGCTGAACAAAAGCTTATGGAAGCAGCATGGGTTGCAACGTGTAGCAGCGGGGAAGAACAAGAAAAGGCACTGAAGCTAGCGAGAGATGCAATAGAGAAGATAGAAGATGAGATTAAGGGGAAGAAATTCTTTGGAGGGGACAATATTGGGTATCTTGATCTCGCTCTCGGATGGATTTCTTACTGGCTTCCAATTTGGGAGGAAGTTGGGTCAATCCAGGTACTTGACCCATTAAGATGGCCAGCCATCTCTTCATGGAAGATCAATTTTCTAAGCAATCCTGTCATCAAGGATAGCTTGCCACCGAGGGATGAAATGAGTGTTTACTTCCACTCTCGTAGAAAGACACTGTTGGAGGATGTTTACTTCAACTCTCGTAGAAAGGCATTGTTGGAGGCATTTCATGGCTGA 714 0.4384 MGSQDVMFVSFWASPNAKRVEWALKIKGVDYEYVEEDIFNKSSLLLELNPVHKMVPVLVHAHKPIVESFVILEYIDETWRQTPLLPHHPYQRALARFWANFAEQKLMEAAWVATCSSGEEQEKALKLARDAIEKIEDEIKGKKFFGGDNIGYLDLALGWISYWLPIWEEVGSIQVLDPLRWPAISSWKINFLSNPVIKDSLPPRDEMSVYFHSRRKTLLEDVYFNSRRKALLEAFHG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04687 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Trre8g04687 237 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
Trre8g04687 237 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Trre8g04687 237 Gene3D - 85 221 - -
Trre8g04687 237 FunFam Tau class glutathione S-transferase 85 221 - -
Trre8g04687 237 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 207 IPR045073 -
Trre8g04687 237 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Trre8g04687 237 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Trre8g04687 237 Pfam Glutathione S-transferase, N-terminal domain 9 77 IPR004045 -
Trre8g04687 237 FunFam Tau class glutathione S-transferase 1 87 - -
Trre8g04687 237 CDD GST_N_Tau 6 79 - -
Trre8g04687 237 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Trre8g04687 237 Coils Coil 118 138 - -
Trre8g04687 237 SFLD Main (cytGST) 2 220 - -
Trre8g04687 237 Gene3D Glutaredoxin 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04687 Trre-Chr8 50578404 50579481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04687 2 218 Glutathione S-transferase Gene Family AT2G29420 45.622 2.17e-71 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04687 K00799 - tpra:123914566 374.4