Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04686 ATGGGAAGCCAAGATGTGAAGTTGGTGAGTTTATGGGTTAGTCCATTTGCTAAGAGAGTTGAGTGGGCCTTGAAACTAAATGGTGTTGATTATGAGTATGTAGAAGAAGATATCTTCAATAAAAGCACTCTCCTTTTAGAATTGAACCCGGTTTACAAGGCGGTTCCGGTTCTTGTTCATGCCCAAAAACCAATTGCAGAGTCATTGATTATCCTTGAATACATTGATGAAACATGGAAGGAGTATCCACTTTTGCCTCACCATCCTTATCAAAGAGCTCTTGCTCGTTTTTGGGCAAACTTTGCTGAACAAAAGCTTTTGGATGTAGCGTGGGTTGCAATGTGTAGCAGTGGAGAACAACAGGAAAAGGCATTGAAGCTAGCCAGAGAAGCATTAGAGAAGATTGAAGAGGAACTTAATGGGAAGAAATTCTTTGGAGGGGACACTATGGGTACCTTGATCTTGCTCTTGGATGGATTTCTTACTGGCTTCCAATTTGGGAGGAAGTTGGGTCTATGCAGATAA 525 0.4152 MGSQDVKLVSLWVSPFAKRVEWALKLNGVDYEYVEEDIFNKSTLLLELNPVYKAVPVLVHAQKPIAESLIILEYIDETWKEYPLLPHHPYQRALARFWANFAEQKLLDVAWVAMCSSGEQQEKALKLAREALEKIEEELNGKKFFGGDTMGTLILLLDGFLTGFQFGRKLGLCR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04686 174 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Trre8g04686 174 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 153 IPR045073 -
Trre8g04686 174 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Trre8g04686 174 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 174 IPR010987 -
Trre8g04686 174 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Trre8g04686 174 FunFam Tau class glutathione S-transferase 1 87 - -
Trre8g04686 174 SUPERFAMILY GST C-terminal domain-like 85 152 IPR036282 -
Trre8g04686 174 CDD GST_C_Tau 89 164 IPR045074 GO:0004364|GO:0006749
Trre8g04686 174 Gene3D - 85 171 - -
Trre8g04686 174 SFLD Glutathione Transferase (cytosolic) 2 160 IPR040079 -
Trre8g04686 174 Gene3D Glutaredoxin 1 84 - -
Trre8g04686 174 CDD GST_N_Tau 6 79 - -
Trre8g04686 174 SFLD Main.3: Omega- and Tau-like 2 160 IPR045073 -
Trre8g04686 174 Coils Coil 118 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04686 Trre-Chr8 50576827 50577351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04686 2 151 Glutathione S-transferase Gene Family AT2G29420 50.000 4.34e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04686 K00799 - tpra:123914566 289.271