Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04685 ATGGGAAGCCAAGATGTGAAGTTGGTGAGTTTATGGGTTAGTCCATTTGCTAAGAGAGTTGAGTGGGCCTTGAAACTAAATGGTGTTGATTATGAGTATGTAGAAGAAGATATCTTCAATAAAAGCACTCTCCTTTTAGAATTGAACCCGGTTTACAAGGCGGTTCCGGTTCTTGTTCATGCCCAAAAACCAATTGCAGAGTCATTGATTATCCTTGAATACATTGATGAAACATGGAAGGAGTATCCACTTTTGCCTCACCATCCTTATCAAAGAGCTCTTGCTCGTTTTTGGGCAAACTTTGCTGAACAAAAGCTTTTGGATGTAGCGTGGGTTGCAATGTGTAGCAGTGGAGAACAACAGGAAAAGGCATTGAAGCTAGCCAGAGAAGCATTAGAGAAGATTGAAGAGGAACTTAATGGGAAGAAATTCTTTGGAGGGGACACTATGGGTACCTTGATCTTGCTCTTGGATGGATTTCTTACTGGCTTCCAATTTGGGAGGAACCACCCTGTGATTAAGGACAACTTGCCCCCAAGAGACAAGATGCTTGTTTACTTCCACACTCGCAGAGAGACATTGTCTGAGGCATTTCATGGCTGGTTCAATGTTTAG 615 0.4244 MGSQDVKLVSLWVSPFAKRVEWALKLNGVDYEYVEEDIFNKSTLLLELNPVYKAVPVLVHAQKPIAESLIILEYIDETWKEYPLLPHHPYQRALARFWANFAEQKLLDVAWVAMCSSGEQQEKALKLAREALEKIEEELNGKKFFGGDTMGTLILLLDGFLTGFQFGRNHPVIKDNLPPRDKMLVYFHTRRETLSEAFHGWFNV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04685 204 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Trre8g04685 204 SUPERFAMILY GST C-terminal domain-like 77 192 IPR036282 -
Trre8g04685 204 CDD GST_C_Tau 89 187 IPR045074 GO:0004364|GO:0006749
Trre8g04685 204 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 154 IPR045073 -
Trre8g04685 204 Gene3D - 85 168 - -
Trre8g04685 204 SFLD Main.3: Omega- and Tau-like 2 153 IPR045073 -
Trre8g04685 204 FunFam Tau class glutathione S-transferase 1 87 - -
Trre8g04685 204 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Trre8g04685 204 SFLD Main (cytGST) 2 153 - -
Trre8g04685 204 CDD GST_N_Tau 6 79 - -
Trre8g04685 204 Coils Coil 118 138 - -
Trre8g04685 204 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Trre8g04685 204 Gene3D Glutaredoxin 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04685 Trre-Chr8 50576827 50577512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04685 2 195 Glutathione S-transferase Gene Family AT2G29420 40.455 3.03e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04685 K00799 - tpra:123914566 339.732