Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04683 ATGGGAGACCGAGATGTGAAGTTGCTTAACTTTTTATTGAGTCCAGTTGGTAGAAGAGTTGAATGGGCACTAAAACTAAAGGGTGTTGATTATGAGTATTTAGAAGAAGATATCTTCAACAAAAGTAGTCTTCTTTTGGAATTGAACCCGGTTCATAAGAAAGTTCCTGTTCTTGTTCATGGCCAGAAATCAATTGCAGAGTCATTGATTATCCTTGAATATATTGATGAAACATGGAAGCAGTATCCATTGCTGCCTCACCATCCTTATCAAAGATCTCATGCTCGGTTTTGGGCCAAGTTATCTGATGAAAAGCTTGCAATGGGTGCATGGATTGCATTGATTAAGAAAGGGGATGGATGGGAAAAGGTTCTAAAAGAGACAAGAGAAGTAATGGAAAAATTAGAAGAGGAGATAAAAGGAAAAAAAAATTTTGGAGGGGACAATATTGGATACCTTGATCTTGCTCTTGGATGGATCACTTGTTGGCTACCTGTTTGGGAGGAAATTGGGTCATTGCAGGTACTTGACCCATTAAAATGTCCAAACATTTCTTCATGGAAGACCAATTTTCTAAGCCATCCTGTGATTAAGGACAACTTGCCACCTAGGGATGAGATGATTGCTTATTGTCACCGTCGCATACAAGAGTATCATGGTTAA 663 0.3876 MGDRDVKLLNFLLSPVGRRVEWALKLKGVDYEYLEEDIFNKSSLLLELNPVHKKVPVLVHGQKSIAESLIILEYIDETWKQYPLLPHHPYQRSHARFWAKLSDEKLAMGAWIALIKKGDGWEKVLKETREVMEKLEEEIKGKKNFGGDNIGYLDLALGWITCWLPVWEEIGSLQVLDPLKCPNISSWKTNFLSHPVIKDNLPPRDEMIAYCHRRIQEYHG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04683 220 Gene3D - 85 218 - -
Trre8g04683 220 FunFam Tau class glutathione S-transferase 1 87 - -
Trre8g04683 220 SFLD Main (cytGST) 3 217 - -
Trre8g04683 220 Gene3D Glutaredoxin 1 84 - -
Trre8g04683 220 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Trre8g04683 220 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Trre8g04683 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Trre8g04683 220 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Trre8g04683 220 FunFam Tau class glutathione S-transferase 85 220 - -
Trre8g04683 220 CDD GST_C_Tau 89 210 IPR045074 GO:0004364|GO:0006749
Trre8g04683 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Trre8g04683 220 CDD GST_N_Tau 6 79 - -
Trre8g04683 220 Coils Coil 118 145 - -
Trre8g04683 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Trre8g04683 220 SFLD Main.3: Omega- and Tau-like 3 217 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04683 Trre-Chr8 50570337 50572035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04683 5 219 Glutathione S-transferase Gene Family AT2G29420 47.442 1.02e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04683 K00799 - tpra:123914566 338.961