Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04675 ATGAAAAGTAAATTCAAAAATCAATATACTCAACAAGAAGAAGACACTGACACATCTCAAGATTCACCTCCTTCTTCCGCTTCATTTGATATCGATGCCTCACTCACTTCCATCTCTTCTTCATCATCTAAGAAAAGCAGGCGAGCCATACAGAAAAGGGTGGTGCAAATTCCAATCAAAGAACCTCAAGGATCAAGACTAAAAGGAGAGAGCAATACTCCACCTTCCGATTCATGGGCATGGAGAAAATACGGTCAGAAACCTATCAAAGGTTCCCCATATCCCAGAGCCTACTACAGGTGCAGCAGTTGCAAAGGTTGTCCAGCAAGGAAACAAGTGGAGAGAAGCCGAGTGGACCCCACAATGCTCGTCATAACATACTCCTCAGACCACAACCACTCATGGCCGGTTTCAAGAAATAATTCAAAAAGACTTGCCGCCAAGAAAACTGAACTAGAACCGGTCGAACCGGACAAGAAATTTGCCGGCCACTTAGTTGTGGACGACGAGTTAGGGTGGTTGGGAGAGATTGACACAACCTCGTCCGCTATTCTGGAGAGTCCAATTATGGCGGAGTTCGATGCTGACATGGCATCCATGTTGTTGCCAATGGAGGAAGAGGATGCTTTGCTATTCGCTGATCTTGGAGAATTGCCAGAGTGTTCCACGGTGTTCCGGCATGGGTTGTTCGACGCGCGGCAGCGGTTAACGGCACCGTGA 720 0.4722 MKSKFKNQYTQQEEDTDTSQDSPPSSASFDIDASLTSISSSSSKKSRRAIQKRVVQIPIKEPQGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSCKGCPARKQVERSRVDPTMLVITYSSDHNHSWPVSRNNSKRLAAKKTELEPVEPDKKFAGHLVVDDELGWLGEIDTTSSAILESPIMAEFDADMASMLLPMEEEDALLFADLGELPECSTVFRHGLFDARQRLTAP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04675 239 Gene3D WRKY domain 65 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g04675 239 SUPERFAMILY WRKY DNA-binding domain 73 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre8g04675 239 SMART WRKY_cls 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g04675 239 FunFam WRKY transcription factor 65 52 136 - -
Trre8g04675 239 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 223 IPR044810 GO:0003700
Trre8g04675 239 MobiDBLite consensus disorder prediction 1 45 - -
Trre8g04675 239 Pfam WRKY DNA -binding domain 77 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre8g04675 239 MobiDBLite consensus disorder prediction 1 83 - -
Trre8g04675 239 ProSiteProfiles WRKY domain profile. 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04675 Trre-Chr8 50513203 50514237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04675 9 227 WRKY Transcription Factor Family AT1G29280 54.772 1.45e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre8g04675 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04675 - - cam:101493438 344.739