Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04665 ATGATTATACACTACATTTACATGTATGCACTTTCGCAGGTCTATATGGGGCTCCAAAATCTATTGGGAAAGCCGGTTTTAGTGGGTGAGGACAATCTAACTTGGACATTGTTGAAGTATGTCAACTCTGAAAATAGTGGTGTTAGCAATGCTGAAAATGACTTAGTAGCAGAGAGTTACACTAAACTCAGTGTTGGACTTTCGGTGATGCATGAATGTTTTGAGCCCTTACATAACTCGTTCTCTAGCAGGGATATCATGGAAGATGTTATATTCAACCAAAGGATATTTGGAGAGAAGATAGCAGAAGTTCCCCTTGTTGGTACAAGATTTCAGTATAGACGACTTGGAATGTGTCGTGTTTTAATGGATGAGCTTGATAAGAAACTAAAGCAACTGGGAGTGGAGAGACTAGTCTTACCTGCTGTTCCTGGTGTGCTTGAAACTTGGACCAGTTCTTTTGGTTTTAAGCAGATGACAAACTTTGAGCGATCACAGTTTTTGGACTACTCGTTCCTAGATTTCCAAGGAACGGTGATGTGTCAGAAACTGTTGTCAAGACATCCATCTCCGGAATCAGATGTGACTAGAGACGCAACAACTCCAAAACAAGATGGTGGTTTTTCTGTAAAATGTAAAATTAATTTTGAAAAGGCTAGTCCGGTTTTTGAAGTCGATCAAGCTGAAGGGATTGGAAAGAGCAGTACAAAGGATTTACAAGTTTGGAGACCAATGCCTAATTCCTAG 747 0.4003 MIIHYIYMYALSQVYMGLQNLLGKPVLVGEDNLTWTLLKYVNSENSGVSNAENDLVAESYTKLSVGLSVMHECFEPLHNSFSSRDIMEDVIFNQRIFGEKIAEVPLVGTRFQYRRLGMCRVLMDELDKKLKQLGVERLVLPAVPGVLETWTSSFGFKQMTNFERSQFLDYSFLDFQGTVMCQKLLSRHPSPESDVTRDATTPKQDGGFSVKCKINFEKASPVFEVDQAEGIGKSSTKDLQVWRPMPNS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04665 248 PANTHER PHD FINGER PROTEIN 12 13 95 IPR042163 GO:0003714|GO:0045892
Trre8g04665 248 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 92 169 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04665 Trre-Chr8 50400236 50402124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04665 12 200 PHD Transcription Factor Family AT5G63900 35.814 6.67e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04665 - - gmx:102661511 312.383