Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04641 ATGGCATTCACCAAGGAACGTGAGAACTTCGTCTACATCGCCAAGCTCGCTGAACAAGCTGAACGCTATGAAGAAATGGTGGAAGCAATGAAGAATGTGGCGAAGCTAAATGTTGAGTTGAGTGTGGAAGAGAGAAACCTTCTATCAGTTGGGTACAAGAATGTGGTGGGTGCTCATAGGGCTTCTTGGAGGATTCTATCCTCAATTGAGCATAAGGAAGAATCTAAAGGGCATGATGTTAATGTGAAGAGGATAAAGGAGTATAGACACAAGGTGGAAACTGAGTTGTCTAATATATGCAGTGATATCATGGCTATTATTGATGATCACCTTATTCCTTCATCATCTAATAGTGAATCTAGTGTCTTTTTCTATAAAATGAAAGGGGATTATTATCGGTATTTGGCGGAATTCAAGTCGGGTGATGAGAGAAAAGAGGCTGCTGATCATTCTATGGAAGCATATCAGACAGCTTCCACTGCAGCAGAAGCTGAGTTACCTCCTACACATCCCATTCGGTTGGGTTTAGCTTTGAATTTCTCTGTCTTTTATTATGAAATTTTGAACTCTCCTGAAAGGGCATGTCACCTTGCTAAGCAAGCATTTGATGAAGCAATCTCTGAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGACAGCACATTGATTATGCAGCTTCTAAGGGATAACCTCACATTGTGGACTTCAGATATCCCTGAAGATGGAGATGAAGAACAAAAGGTGGAATCTTCGCGAGCTGGTGGAGGTGAAAATGCATAG 780 0.4154 MAFTKERENFVYIAKLAEQAERYEEMVEAMKNVAKLNVELSVEERNLLSVGYKNVVGAHRASWRILSSIEHKEESKGHDVNVKRIKEYRHKVETELSNICSDIMAIIDDHLIPSSSNSESSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMEAYQTASTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGDEEQKVESSRAGGGENA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04641 259 FunFam 14-3-3 protein epsilon 2 248 - -
Trre8g04641 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Trre8g04641 259 PANTHER 14-3-3 PROTEIN 7 238 IPR000308 -
Trre8g04641 259 Pfam 14-3-3 protein 14 235 IPR023410 -
Trre8g04641 259 MobiDBLite consensus disorder prediction 236 259 - -
Trre8g04641 259 Coils Coil 13 46 - -
Trre8g04641 259 PIRSF 14-3-3 1 248 IPR000308 -
Trre8g04641 259 Gene3D - 1 250 IPR036815 -
Trre8g04641 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Trre8g04641 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Trre8g04641 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Trre8g04641 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Trre8g04641 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Trre8g04641 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Trre8g04641 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Trre8g04641 259 SMART 1433_4 7 248 IPR023410 -
Trre8g04641 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04641 Trre-Chr8 50194202 50196963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04641 1 259 14-3-3 family AT2G42590 77.481 4.28e-151 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04641 K06630 - gmx:100807980 461.84