Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04638 ATGGCTATTTGGCTAAAAAAGCTCATCCCTGTGTTCTTGTTCTGCTTCTTAATTGCAGTTGTAGTTGCAGAAACTATTTACCCTGATAACCAATGCAAAGAATCAAGTTGTGATGGTATTCATGGACCAGTCATAAGATTCCCATTCAGACTCAAAGGAAAACAACCAAAATGGTGTGGCTACAATAATTCCTGGTTTGAGTTATACTGCACCAAAACCAACCAAACAGTGTTAGAACTCCCTTTTTCTTATAAAACCATCATCAAAACCATAGACTACACTTCACAAGTCATTACAGTTTCTTATCCTGAATTTTGCCTTCACAAACAAATTCCTAATTTTGACATATCCTCATCTCCCTTTCAGTTCAACCATGACTTTGGACTCAAACAATATGCTTTATTCAATTGTTCAGGGACTTCTCAGAGAAACACAGATAACATAATAACATCTGGAAACTTTTCTTGTCTAAATGTTCCGGGATTTGAAGTTATAGCAGTGAATTCAGAATCATCAATAATCAGGACACCCTTGCTGTCCTGTACCAGGATCCAAAACCTTGTATTGTTGCCTAATTCTTTGTTTAACAACAACGTTGACGCTGGTCTCAATTGGTTCCAACCTGATTGCAGAAACTGTGAACGAAAAGGTGGGCAATGCAAGGCCAAAAGAAACACATCTCAACACAAATTTGAATGTATAGGCATCATTAAAGGTTCATCAAAAGGGAAAGTGTTTGCTGGTGGAATCATAGGCCCATTTTCTCTGATATTTGTTGGAGTCGCGGCATATTGTGTCTATTGGCATCCGGCGAATCGTCCAACCATGAAGGTTGTGGTTCAAATGCTGGAAGGAAATGGTGAGAAGTTAGAGATGCCACCTAATCCTTTTGCCTCTGCATCGACAACCAGAACAGGTGCTAGACATCTGAACTTGGAGCTAGATGTCATCTCAGAAATAGAGTGA 966 0.3923 MAIWLKKLIPVFLFCFLIAVVVAETIYPDNQCKESSCDGIHGPVIRFPFRLKGKQPKWCGYNNSWFELYCTKTNQTVLELPFSYKTIIKTIDYTSQVITVSYPEFCLHKQIPNFDISSSPFQFNHDFGLKQYALFNCSGTSQRNTDNIITSGNFSCLNVPGFEVIAVNSESSIIRTPLLSCTRIQNLVLLPNSLFNNNVDAGLNWFQPDCRNCERKGGQCKAKRNTSQHKFECIGIIKGSSKGKVFAGGIIGPFSLIFVGVAAYCVYWHPANRPTMKVVVQMLEGNGEKLEMPPNPFASASTTRTGARHLNLELDVISEIE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04638 321 Pfam Wall-associated receptor kinase galacturonan-binding 32 101 IPR025287 GO:0030247
Trre8g04638 321 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 12 268 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04638 Trre-Chr8 50177015 50179524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04638 44 286 C3H Transcription Factor Family AT2G25410 31.298 1.50e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04638 - - tpra:123914140 502.286