Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04637 ATGGCTATTTGGCTAAAAAAGCTCATCCCTGTGTTCTTGTTCTGCTTCTTAATTGCAGTTGTAGTTGCAGAAACTATTTACCCTGATAACCAATGCAAAGAATCAAGTTGTGATGGTATTCATGGACCAGTCATAAGATTCCCATTCAGACTCAAAGGAAAACAACCAAAATGGTGTGGCTACAATAATTCCTGGTTTGAGTTATACTGCACCAAAACCAACCAAACAGTGTTAGAACTCCCTTTTTCTTATAAAACCATCATCAAAACCATAGACTACACTTCACAAGTCATTACAGTTTCTTATCCTGAATTTTGCCTTCACAAACAAATTCCTAATTTTGACATATCCTCATCTCCCTTTCAGTTCAACCATGACTTTGGACTCAAACAATATGCTTTATTCAATTGTTCAGGGACTTCTCAGAGAAACACAGATAACATAATAACATCTGGAAACTTTTCTTGTCTAAATGTTCCGGGATTTGAAGTTATAGCAGTGAATTCAGAATCATCAATAATCAGGACACCCTTGCTGTCCTGTACCAGGATCCAAAACCTTGTATTGTTGCCTAATTCTTTGTTTAACAACAACGTTGACGCTGGTCTCAATTGGTTCCAACCTGATTGCAGAAACTGTGAACGAAAAGGTGGGCAATGCAAGGCCAAAAGAAACACATCTCAACACAAATTTGAATGTATAGGCATCATTAAAGGTTCATCAAAAGGGAAAGTGTTTGCTGGTGGAATCATAGGCCCATTTTCTCTGATATTTGTTGGAGTCGCGGCATATTGTGTCTATGGTAAATACAATAGCCAATAG 822 0.3759 MAIWLKKLIPVFLFCFLIAVVVAETIYPDNQCKESSCDGIHGPVIRFPFRLKGKQPKWCGYNNSWFELYCTKTNQTVLELPFSYKTIIKTIDYTSQVITVSYPEFCLHKQIPNFDISSSPFQFNHDFGLKQYALFNCSGTSQRNTDNIITSGNFSCLNVPGFEVIAVNSESSIIRTPLLSCTRIQNLVLLPNSLFNNNVDAGLNWFQPDCRNCERKGGQCKAKRNTSQHKFECIGIIKGSSKGKVFAGGIIGPFSLIFVGVAAYCVYGKYNSQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04637 273 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 12 266 IPR046948 -
Trre8g04637 273 Pfam Wall-associated receptor kinase galacturonan-binding 32 101 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04637 Trre-Chr8 50177015 50179895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04637 44 273 C3H Transcription Factor Family AT2G25410 32.800 1.07e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04637 - - tpra:123914140 502.286