Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04557 ATGGATTTTATAAATTTACAGGCAAATCAGACCTTATTCTTGGAATTAACAGCCACAACTTTATCTTCAGATTCTACAACCGTAAGCTTCAACGTTTGTATTGCGGCTCCACCAAATATTGTTTCAGATGGATTTTGGGGTGGACAAATAAATGGAAGGGTTCCATGGAAATCTGCACTTCCTATGTTTGAGATGCAGGTCCTTGTGATTTTTACCATCACACAAATCTTCAATTTATTCCTAAAACGTTTCGATTTCCCTGAATTTATTGGACAAATGATGGCTGGCTTAATTTTAGGTCCTTCAATTCGACTAGGAGAAATCGACAAATACAAGAAAAAATTGTTTATATATGGAAGTCAAGACATACTTGAAACAATAACATCATTTGGTTATGCACTCTTTATCTTTATCAATGCTGTGCAAATGGATTTGACCATGGTAACAAGGACAGGACAAAAGGCTTGGACCATTGCAATCATGGGATTGGCTATGCCTTTATTCATTTGTGTTTTTACTCTTTATCAAAGTATGGCTGATCTTCCTAGTGTGGTGCTATCACATACTGTAACCTCATTTGCAGTCATTGCTTCGCTCCTCAACGAACTTAAAATCATTAACTCCGAACTTGGAAGGTTGGCCTTATCCTCAGCGTTGGTGAGTGACATACTAGGAACATCTATCGGATGTATGTTTAATGTCGTAAAGTATCCAGGTGGATTACTCAAGTACATAACAATTGGGATGCCATTGTTAGCTTTTGTTATCTTAGTTCCGTTGATTTTTCGGCCATTAATGTTTTGGATCATCAAAAATACTAGAGAAGGAAGACCTGTGGATGATGGTTATATCTATGTTATCATTGTAATGGTGTTTATTTTAGGTTGGGCTTCAGTTTGCATAAACCAAGATTTCGTCTTAGGTGCATTTGTTTTGGGGTTGGCTGTGCCAGAAGGACCTCCATTAGGATCTGCATTGGTTAAGAAGCTTCAATTCTTTGGTATAAGTTTATTTCTGCCTATATTTGTGACTTGTGGTGCGATGAAGGCAGACTTGTCTTTGCCAGAGACACTAGAAGCATTTATTTATACTGGTGGTACCATTGGCTTTACACACTTGATCAAAATGATAGCATACCTTATACCTTCTCTCATTTGCAAGATCCCCTTGAAAGATGCCTTGGCTCTTGCCCTCATTTTGAATGCCAAAGGTGTAGTGGATGTTGGCACATTTTCTGCCTCATATGATGGAAAGCTTTTTAAAAACACAACTTATGGAGTGATGATGGTCAGCATTATGATCATAGCATGCTTAGTAAAATGGTCAGTGAAGATATTGTATGACCCATCAAGAAAATATGCTGGCTACCAGAAAAGGAACGTCATGAGTTTAAAACCGGATGCAGAATTGAGACTACTTGCCTGCATTCACAAAAAATGCAACATATCAGCTATAACAGATTGCATTGACGTTTGTTCTCCGATAACAGAACAACCTATCAGTGTGGATGCATTGCATCTTATTGAGCTAGTTGGAAGGACATCACCCATTTTCATCTCCCATCATCTTCAAAAAACGGTTTCGTGTTCCGGCAAGTCTTACTCAGATGATGTCATTCTAGCTCTTGACCTCTATGAACATGAAAACTATGGTGGAGTAACTACACGCGCTTTCACAGCCATATCTCCACCTGCGCTTATGCATGAAGACGTTTGCCAACTTGCATTGGACAAAGTTGCATCCATCGTGATTCTTCCTTTCCACATAAGATGGACTGTGGATGGTGGTATTGAATCTGATGACAAGAACATAAGGTCCTTAAATTGTAAGGTACTAGAAGTATCTCCATGCACAGTAGGAATCCTCGTGACTCGTACTTTGTTACAAGACAACTCATTCATTAAGCTAGCCATGATTTATCTCGGTGGAAGAGATGACAGAGAGGCTTTGTGCTTAGCTAAAAGAGCAATAAGGAACCCGAAAATCAACTTGGTTGTGTACCACCTTACACATGAGCAACGTGTGCCAAACTTGGAATATATACTAGATAATGACGCACTAGAAGAATTAAAGAAACTACCGCACTATGGCTCGGAAAATGTTTATTACCAAAAAGTGATTGTGAATGATGGTCCCGAGACATCTTCTGTTCTTCGCGATATAGCAAATGAACATGATTTTTTCATTGTTGGGAGAAAACATGCCTTAGACTTACCTCAGATACAAGGGCTAACCAAATGGAGTGAATTTTCTGAGTTAGGTGTGATTGGTGATTTACTTGCTTCACGAGATTTTGAGAGCCGAGCTGGTGTTTTGGTAGTGCAGCAACAAGTCAAAGACAGATAG 2346 0.39 MDFINLQANQTLFLELTATTLSSDSTTVSFNVCIAAPPNIVSDGFWGGQINGRVPWKSALPMFEMQVLVIFTITQIFNLFLKRFDFPEFIGQMMAGLILGPSIRLGEIDKYKKKLFIYGSQDILETITSFGYALFIFINAVQMDLTMVTRTGQKAWTIAIMGLAMPLFICVFTLYQSMADLPSVVLSHTVTSFAVIASLLNELKIINSELGRLALSSALVSDILGTSIGCMFNVVKYPGGLLKYITIGMPLLAFVILVPLIFRPLMFWIIKNTREGRPVDDGYIYVIIVMVFILGWASVCINQDFVLGAFVLGLAVPEGPPLGSALVKKLQFFGISLFLPIFVTCGAMKADLSLPETLEAFIYTGGTIGFTHLIKMIAYLIPSLICKIPLKDALALALILNAKGVVDVGTFSASYDGKLFKNTTYGVMMVSIMIIACLVKWSVKILYDPSRKYAGYQKRNVMSLKPDAELRLLACIHKKCNISAITDCIDVCSPITEQPISVDALHLIELVGRTSPIFISHHLQKTVSCSGKSYSDDVILALDLYEHENYGGVTTRAFTAISPPALMHEDVCQLALDKVASIVILPFHIRWTVDGGIESDDKNIRSLNCKVLEVSPCTVGILVTRTLLQDNSFIKLAMIYLGGRDDREALCLAKRAIRNPKINLVVYHLTHEQRVPNLEYILDNDALEELKKLPHYGSENVYYQKVIVNDGPETSSVLRDIANEHDFFIVGRKHALDLPQIQGLTKWSEFSELGVIGDLLASRDFESRAGVLVVQQQVKDR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04557 781 Pfam Sodium/hydrogen exchanger family 68 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre8g04557 781 Gene3D - 62 454 IPR038770 -
Trre8g04557 781 PANTHER CATION/H + ANTIPORTER 45 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04557 Trre-Chr8 49563906 49569742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04557 32 777 Antiporter Super Family AT5G22900 35.229 4.48e-154 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04557 K26731 - gmx:100797995 990.719