Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04533 ATGATTAAGCCATACTCTTTTGGTCACCCAAGAGTTGATGCTGTTGCGGCCAAGTATCTTCAACAAGATCCTGAACCAAGTGACTCAGAAGAAGACCCCTCTTCAGATGCTTCCAATATGGACGAGTTGAATATGGAACTTGATGAGGTGTTGGCCCAAATCCGTGAAGATGAAAAGCAGGCTGAGACTTATGATAAGATCCTGAAGCAAAATGATGTGACAACATTCTCTGACCTTGAAGAATTAAGAGACTCATATAAAGAGTTTCAGGACGGGGTAAAATTGCATCTTAGTGATCTCGAGATATCAGAATGTATGATGCTTCTTGCTAAGGAGCCAGTGGTGGGGGTTAAAGTGTAA 360 0.4194 MIKPYSFGHPRVDAVAAKYLQQDPEPSDSEEDPSSDASNMDELNMELDEVLAQIREDEKQAETYDKILKQNDVTTFSDLEELRDSYKEFQDGVKLHLSDLEISECMMLLAKEPVVGVKV 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04533 119 MobiDBLite consensus disorder prediction 21 43 - -
Trre8g04533 119 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04533 Trre-Chr8 49361289 49361648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04533 3 71 Type I MADS-box Gene Family AT2G24840 31.429 3.62e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04533 - - mtr:11439559 130.954