Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04522 ATGGGAAAGCCGTGCAAGGATTGTCAGTCTGGAAGTCTGAATGAAACAACGGCAGCAGGAAAAATTGTTCTATGCTTTTCAGTATCGGATCAACAGGATATCGTTTCTGCAGCACTTACAGTAAAGGAAGCCGGTGGAGTTGGACTAATATATGCACAACATCAAGAAGATGGACTCAATGAATGTGGTATACTTCCATGCATTAAGGTAGATTATGAAGTAGGAACACAACTATTAACCTATATTAGAAGAACAAGAGGACCAAGTACCTTGTCTCCAACTGTGCTAAAGCCTGACATAGCTGCACCTGGTGTGGACATTTTGGCTGCATTTCCACCTAAGGGAACTAAAAAGAGCAGTGGCTTTACATTCTTATCTGGAACTTCAATGTCTTGTCCCCATGTAGCAGGAATAGCTGCACTCATCAAATCCAAACACCTCAATTGGTCACCTGCGGCCATAAGATCGGCTTTGGTAACAACAGCCTCTCAAAATGGAACTGATGGAAGCCTTATATCAGAAGAAGGTTCTACAAATAATAAGGAAGCAAATCGCTTTGATCCGTTTGATATCGGCGGTGGACACGTGGATCCAAACAAAGCAATGAATGCATGA 615 0.4244 MGKPCKDCQSGSLNETTAAGKIVLCFSVSDQQDIVSAALTVKEAGGVGLIYAQHQEDGLNECGILPCIKVDYEVGTQLLTYIRRTRGPSTLSPTVLKPDIAAPGVDILAAFPPKGTKKSSGFTFLSGTSMSCPHVAGIAALIKSKHLNWSPAAIRSALVTTASQNGTDGSLISEEGSTNNKEANRFDPFDIGGGHVDPNKAMNA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04522 204 SUPERFAMILY Subtilisin-like 85 203 IPR036852 GO:0004252|GO:0006508
Trre8g04522 204 ProSiteProfiles Serine proteases, subtilase domain profile. 1 202 - -
Trre8g04522 204 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 203 IPR045051 -
Trre8g04522 204 MobiDBLite consensus disorder prediction 165 204 - -
Trre8g04522 204 MobiDBLite consensus disorder prediction 165 184 - -
Trre8g04522 204 Pfam Subtilase family 86 167 IPR000209 GO:0006508|GO:0008236
Trre8g04522 204 Gene3D Peptidase S8/S53 domain 86 204 IPR036852 GO:0004252|GO:0006508
Trre8g04522 204 Gene3D - 6 84 - -
Trre8g04522 204 CDD PA_subtilisin_like 7 90 - -
Trre8g04522 204 ProSitePatterns Serine proteases, subtilase family, serine active site. 127 137 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04522 Trre-Chr8 49300573 49303304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04522 7 201 Subtilisin-like Serine Gene Family AT4G10540 45.778 5.02e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04522 - - gmx:100792709 325.479