Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04521 ATGTCATTATGGTTCGCTGGACCGCTCACGGTATCCCATGAGTTCCATGGGAAAGCCGTGGATTGTCAGTCTGGAAGTCTGAATGAAACAACGGCAGCAGGAAAAATTGTTCTATGCTTTTCAGTATCGGATCAACAGGATATCGTTTCTGCAGCACTTACAGTAAAGGAAGCCGGTGGAGTTGGACTAATATATGCACAACATCAAGAAGATGGACTCAATGAATGTGGTATACTTCCATGCATTAAGGTAGATTATGAAGTAGGAACACAACTATTAACCTATATTAGAAGAACAAGAGTTGCATCTTTCTCATCTAGAGGACCAAGTACCTTGTCTCCAACTGTGCTAAAGCCTGACATAGCTGCACCTGGTGTGGACATTTTGGCTGCATTTCCACCTAAGGGAACTAAAAAGAGCAGTGGCTTTACATTCTTATCTGGAACTTCAATGTCTTGTCCCCATGTAGCAGGAATAGCTGCACTCATCAAATCCAAACACCTCAATTGGTCACCTGCGGCCATAAGATCGGCTTTGGTAACAACAGCCTCTCAAAATGGAACTGATGGAAGCCTTATATCAGAAGAAGGTTCTACAAATAATAAGGAAGCAAATCGCTTTGATCCGTTTGATATCGGCGGTGGACACGTGGATCCAAACAAAGCAATGAATGCATGA 678 0.4292 MSLWFAGPLTVSHEFHGKAVDCQSGSLNETTAAGKIVLCFSVSDQQDIVSAALTVKEAGGVGLIYAQHQEDGLNECGILPCIKVDYEVGTQLLTYIRRTRVASFSSRGPSTLSPTVLKPDIAAPGVDILAAFPPKGTKKSSGFTFLSGTSMSCPHVAGIAALIKSKHLNWSPAAIRSALVTTASQNGTDGSLISEEGSTNNKEANRFDPFDIGGGHVDPNKAMNA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04521 225 Pfam Subtilase family 37 188 IPR000209 GO:0006508|GO:0008236
Trre8g04521 225 Gene3D Peptidase S8/S53 domain 99 225 IPR036852 GO:0004252|GO:0006508
Trre8g04521 225 ProSitePatterns Serine proteases, subtilase family, serine active site. 148 158 IPR023828 -
Trre8g04521 225 MobiDBLite consensus disorder prediction 186 205 - -
Trre8g04521 225 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 224 IPR045051 -
Trre8g04521 225 ProSiteProfiles Serine proteases, subtilase domain profile. 1 223 - -
Trre8g04521 225 CDD PA_subtilisin_like 21 100 - -
Trre8g04521 225 SUPERFAMILY Subtilisin-like 92 224 IPR036852 GO:0004252|GO:0006508
Trre8g04521 225 Gene3D - 18 98 - -
Trre8g04521 225 MobiDBLite consensus disorder prediction 186 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04521 Trre-Chr8 49300527 49303304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04521 21 222 Subtilisin-like Serine Gene Family AT4G10540 48.000 4.97e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04521 - - gmx:100792709 338.961