Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04519 ATGGAAACTAATTCAGGAAACAAGAGATGTGCAAGAAAGTTTCAATTGCTTGTAACTTCAACTCTTCTTTTACTGCAAAATTTTCTGATCATCCCTCAGATATTTGCAGATGAAATTAGCTCAGTGCATATTGTATACATGGGAGATAAGATATATCATAATACAGAAACTACTAAAAAGTATCACCAAAATATGCTGACTTCACTCCTAGGAAGCAAAGAAGCTGCAAAGAATTCACTTCTTTATAGCTATAAGCATGGATTTTCAGGGTTTGCTGCTAGAATGTCAAAGTCTCAAGCTCAAGATATAGCAAAGTTTCCTGAGGTAGTTTCTGTCATTCCAAATGGCATTCACAAACTTCATACAACTAGAAGTTGGGACTTTATTGGGGTCCATCATCCTTCCTCAAAAACTGATTTCGCCGAAAGCAACTTAGGTGAAGGAACCATCATAGGTGTTATTGACACAGGAATTTGGCCAGAGTCAGCAAGTTTTAATGATGAAGCAATGGGAAAAATTCCATCAAAATGGAAAGGAGTTTGTCAAGTGGGAGAAAACTTCAACTCCACCAACTGCAACAAGAAGATAATTGGTGCTAGATGGTTCCTAAAAGGAATAAATGATCACACTAAGAACCTAATCCTTGGAAAAAATGACACTTCAGAATATCTCTCAGCTAGAGATGCTATTGGTCATGGAACTCACACGGCTTCAACCGCAGCTGGATATTTCGTCGAAAATGCAAATTATAAAGGACTTGCTTCTGGTTTAGCAAGAGGAGGAGCACCTTTGGCTCACTTGGCTATCTACAAAGTTTGTTGGGACGTTCCTATCGGACACTGCACTGATGCTGATATCCTCAAAGCATTTGACATGGCTATACATGATGGTGTTGATGTCTTAACCGTTTCGCTTGGTATCACCATTCCTTTGTTTTCTTATGTTGATCAACGCGACACGATAGCAATTGGTTCTTTCCATGCAACTTCTAAGGGTATAACAGTTGTGTGTTCAACTGGAAATTCTGGCCCTACTTCTCAAACCATTACAAATACAGCTCCATGGCTCATTACAGGACAGTCCATTGACAATGGAAAACATAATCTTGGATTTGTTGGCCTCACATACTCCGAACGCATTGCTCGTGATCCATCGGATGATTTAGCCAAGGATTGTCAGTCTGGAAGTCTGAATGAAACAATGGCAGCAGGAAAAATTGTTCTATGCTTTTCAGTATCAGATCAACAGGATATTGTTTCTGCAGCACTTGCAGTAAAGGAAGCCGGTGGAGTTGGACTAATATATGCACAAGATCAAGAAGATGGACTCAATGAATGTGGTATACTTCCATGCATTAAGGTAGATTATGAAGTAGGGACACAGCTATTAACCTATATTAGAAGAGCAAGGTTTCCAACAGCAAGAATAAGTTTTCCAAAGACTGTTATCGGAAAATGGATATCTCCAAGAGTTGCATCTTTCTCATCGAGAGGACCTAGTACCTTGTCTCCAACTGTGCTAAAGCCTGACATAGCTGCACCTGGTGTGGACATTTTGGCTGCATTTCCACCTAAGGGAACTAAAAAGAGCAGTGGCTTTACATTCTTATCTGGAACTTCAATGTCTTGTCCCCATGTGGCAGGAATAGCTGCACTCATCAAATCCAAACACCCAAATTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGCCTCCCAAAGTGGAACTGATGGTAGCCTTATATCAGAAGAAGGTTCTACAAATAAGGAAGCAGACCCATTTGATATCGGCGGTGGACACGTGGATCCAAACAAAGCAATGAATGCAGGACTCATATACAACATAACCACAGAGGATTATATCCAGTTCCTATGTTCCATGGGACATAATACAGCATCCATTAGAAAAGTGACAAAAACTACTACAAGTTGCAACAAACAAAAAAACAAAGCATTGATAAACCTTAACCTTCCTTCCATATCAATTCCAAATCTGAATAGGGATGCAACAGTAATAAGAACAGTAACAAACGTTGGAAACATAAATGTAGTCTACAAAGCTATAGTGAAGAGTCCATATGGCATAAAAGTGAAAGTTGAACCTCAAAATTTGAGGTTCAATTCAGAAACTAAAGTTCTTACCTTCAATGTTAGCTTCATTTCAACTCAAAAGTTGCATGGTGATTATAGATTTGGAAGCCTAACTTGGACAAATGGAAAACATTTTGTTAGGACACCAATAGCTGTGAGGACTATACAATTTGAATCTTAA 2277 0.3913 METNSGNKRCARKFQLLVTSTLLLLQNFLIIPQIFADEISSVHIVYMGDKIYHNTETTKKYHQNMLTSLLGSKEAAKNSLLYSYKHGFSGFAARMSKSQAQDIAKFPEVVSVIPNGIHKLHTTRSWDFIGVHHPSSKTDFAESNLGEGTIIGVIDTGIWPESASFNDEAMGKIPSKWKGVCQVGENFNSTNCNKKIIGARWFLKGINDHTKNLILGKNDTSEYLSARDAIGHGTHTASTAAGYFVENANYKGLASGLARGGAPLAHLAIYKVCWDVPIGHCTDADILKAFDMAIHDGVDVLTVSLGITIPLFSYVDQRDTIAIGSFHATSKGITVVCSTGNSGPTSQTITNTAPWLITGQSIDNGKHNLGFVGLTYSERIARDPSDDLAKDCQSGSLNETMAAGKIVLCFSVSDQQDIVSAALAVKEAGGVGLIYAQDQEDGLNECGILPCIKVDYEVGTQLLTYIRRARFPTARISFPKTVIGKWISPRVASFSSRGPSTLSPTVLKPDIAAPGVDILAAFPPKGTKKSSGFTFLSGTSMSCPHVAGIAALIKSKHPNWSPAAIRSALVTTASQSGTDGSLISEEGSTNKEADPFDIGGGHVDPNKAMNAGLIYNITTEDYIQFLCSMGHNTASIRKVTKTTTSCNKQKNKALINLNLPSISIPNLNRDATVIRTVTNVGNINVVYKAIVKSPYGIKVKVEPQNLRFNSETKVLTFNVSFISTQKLHGDYRFGSLTWTNGKHFVRTPIAVRTIQFES 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04519 758 Gene3D - 626 754 - -
Trre8g04519 758 Gene3D - 361 483 - -
Trre8g04519 758 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 751 IPR045051 -
Trre8g04519 758 Gene3D Peptidase S8/S53 domain 148 358 IPR036852 GO:0004252|GO:0006508
Trre8g04519 758 Gene3D Peptidase S8/S53 domain 484 622 IPR036852 GO:0004252|GO:0006508
Trre8g04519 758 FunFam Subtilisin-like protease SBT5.3 32 121 - -
Trre8g04519 758 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 35 121 IPR037045 -
Trre8g04519 758 ProSiteProfiles Serine proteases, subtilase domain profile. 125 609 - -
Trre8g04519 758 SUPERFAMILY Subtilisin-like 41 659 IPR036852 GO:0004252|GO:0006508
Trre8g04519 758 CDD Peptidases_S8_3 118 574 IPR034197 -
Trre8g04519 758 Pfam Peptidase inhibitor I9 42 121 IPR010259 -
Trre8g04519 758 CDD PA_subtilisin_like 357 476 - -
Trre8g04519 758 FunFam Subtilisin-like protease SBT1.5 148 384 - -
Trre8g04519 758 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Trre8g04519 758 Pfam Subtilase family 146 577 IPR000209 GO:0006508|GO:0008236
Trre8g04519 758 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Trre8g04519 758 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Trre8g04519 758 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Trre8g04519 758 Pfam Fibronectin type-III domain 656 751 IPR041469 -
Trre8g04519 758 FunFam subtilisin-like protease SBT1.5 344 483 - -
Trre8g04519 758 FunFam Subtilisin-like protease SBT1.5 626 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04519 Trre-Chr8 49292820 49296916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04519 40 753 Subtilisin-like Serine Gene Family AT1G32960 48.925 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04519 - - gmx:100792709 1232.62