Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04508 ATGCATAACCAAGATCAAACTCCAGGACACGAAAATCATGGAGTTTATGTGTGTCACAAATGTGGATGGCCTTACCCAAATCCACATCCTAGTGCTAAACACAGACGTTCTCACAAGAAGATCTGTGGAACCATTCAAGGTTACAAACACCAACAAACACAAGGTTTGGTTGTGTCTGGTTCAAATAATGAGAATGATGGAATTGAAGGGAAATTAATTAGGTCAGAAAGTGAGGTGTATTCAGATGCAGTTGCTGATTTTTCAGATAATAATGGATCAAGTCCAGGAGTTAAGCAAATTTTGCAACAAGAACGAGATAGTTTGGACTCAGGCATTGATTTCGAAAGAGTCAACAACATAAAGGAGCATACTCTTTTAGCTTCTTCCAAGTACAATGACTTTAATGCTGCAGATGAGAGTCCATTGATTGCCAACTCAAGCAATGACGGCCACATTAAAAATCCAAAAATTCCACCATGTGAAAGTTCTGAAGTTGGAAATACAGTTGGGTCGCAAGGTCAATCCTCAGTCTCTACTGTGGATCCATTAACAAGCTCAATTGCAGATTTGAAGACTGAAGAATCGAGTATTGTGCATGGTGATGGTTTTTCTGGTTTGTCAAGAAGCGATGAGGTAAAATCAGAAAGAGACATGGTTGAAATTTTGGAGTCAACTGATAGCATTGTAAGTGATGGAGCTGTTAATCCGATGGAAAATAAGGGATCCGAGTTTGTTTCTTTGCTGCCCCAAAATGAACTTCCTGTAGAGGTAAACTCGTCTATAATCACAAATGATGCTCAGTTAGAATCTGCACGTGCAATACAGTCTACTACTTGCAGTGAAGTCAAGGTTTCACAGGAAAAGGAAGACATGAATGTTAATATTGATCCACTTCCTGTGCATGATGATAAACTTGATGTAGCTTATCCTCAGAGTGAGTTATTGAAACACGAGGAAGATGTTACCAATGAAAATAATTCTCATTTCAACACAAACCAATTGAGTGAAAGGAGTCATGTCATCTCTTCAGATATGAATCTTATGGATAGTAAAATGAAGACGGACTCTGACGATTGTTCTGAAGTTTCGTTGGTTGAACTCACAACCGAAACTTATCAAAGACCACATGAAATTGGAGTTTCTATGAAACCTGAGATGAATGAGAATAATTTTTCTGAAGAACATGGACCTGGTGACATTCATGAAAATTCTCAACCCGAAAGTAGTTTTATGGTTTCATCAAATGAATATCAGAGGGAGACGTCCTTTCAGTCTGCGACCGATGACACATTCAACATCAATAATGACACAGCTGAAATAAATGATGTATCAGTAGATGGAAAGATTATAGGAGCTAATGTGGAAAATGACACTGAAGTTATAGTCAAAGATTTCCAACCTAGTGACCTCTTGCAACCAGAAGTTGAGCAATCAAGTGACTTATTTAGGAATAATAGCGATGATGCTGGTGAAACTGGTAAAATTGAAGGTGAAATCAATAGCAATATCAACATATATGAAGAACATAACGAACCCACTGGTATTGCTGCTGGCTCACATGAAGAACAAGATGCACAACTATTGGTGACTGCTGCGGAAGACTCATATGAAGAACAAGATGCACATCTATCAGTGAATGCTGCGGAAGACTCGCATGAAGAGCAAGATGCACAACTATCGGTGAATGCTGCGGAAGACTTTTCCAGCAAGCATACACCACATTCTTCGATAAATACTGTTCCTTCTGCTCAACTCGATTCTGCTGTTGAAGATGATACTACTGGAGAGCCTGTTCAAGATCAAAGCAATAATACATCGGTTAAATTTGGTTCATCTGGAATTGATACTTCCGCCGACTCACTTGAAGCGCGAGATGCACAACTATTAGTGAAGGCTATAGAAGACCTTGCAAGCAAGTATACATCAAATTCTTTTATAAATGCCGAGACTTCTGCCGTTGAAGATAATTCAGATGAAGTGACCAGAGTTACTGATGTGCCACTGCCTGTTCAAGATCAAAGCGTTAATAATTTGACTAAACTAACTTCACCCGGAACTGAGGCTTCGGTTGACTCTGGTAGCCGGCGTTACAGTTTGGATGGAAACTGGGGCTCTAGTTCAGTTATCTCGATGATATCTGATGCACCAGCTGTTCTTGATGGAGAAACCTTACCATCAACTGGTCCACAGGCATCAACAGAAGCTAGCAAATCAGACGTGAACATCCCACGGGCTGCACCTGCTGATAGACAGCTATCTGGAAAATCAGAAACGTTTGAGCTTCCATCTTTCACGACATTGGTTGAGCCAAGCCATGTGGCAGCTAGTCCTAACGGTGCCACAACGGCTTCTGAAATCCAGAACCCGCAACAGTCAAATTCCACCTCACAAGCTGCTTGGTTTCCAACTCTAAATCAGGTTATCAACGAGCCTCAAGGCAGAAAAAAGAACGAAGAGACAATCAGCAAGATAACAAAACGAAGCAGCAGTAAAGAGCACACACCTCTGAAGAGTCTCTTGGGTGAGGCCACTAATAGCAGCAGCAATCCGAAATCACCAAAAATGGAAGAAAATAATAAAGGTTCTGGATTGACAACTGTTAACTCGATTCTTGGTCCCGAGTCCCCTTCGGCAGCTCAAACTGCGAAAGAAAAGGCCGCAAATGAATGGAACTCTCCAGCAAGATATCCTGCAAACATCAAGAGAGAGAAAAAGAAATTGAAGAGCAGACCATTTTGGATACAGTTGGTTTGTTGCTCAACAGTGGATCCTCAGCGCCGGTAG 2784 0.4098 MHNQDQTPGHENHGVYVCHKCGWPYPNPHPSAKHRRSHKKICGTIQGYKHQQTQGLVVSGSNNENDGIEGKLIRSESEVYSDAVADFSDNNGSSPGVKQILQQERDSLDSGIDFERVNNIKEHTLLASSKYNDFNAADESPLIANSSNDGHIKNPKIPPCESSEVGNTVGSQGQSSVSTVDPLTSSIADLKTEESSIVHGDGFSGLSRSDEVKSERDMVEILESTDSIVSDGAVNPMENKGSEFVSLLPQNELPVEVNSSIITNDAQLESARAIQSTTCSEVKVSQEKEDMNVNIDPLPVHDDKLDVAYPQSELLKHEEDVTNENNSHFNTNQLSERSHVISSDMNLMDSKMKTDSDDCSEVSLVELTTETYQRPHEIGVSMKPEMNENNFSEEHGPGDIHENSQPESSFMVSSNEYQRETSFQSATDDTFNINNDTAEINDVSVDGKIIGANVENDTEVIVKDFQPSDLLQPEVEQSSDLFRNNSDDAGETGKIEGEINSNINIYEEHNEPTGIAAGSHEEQDAQLLVTAAEDSYEEQDAHLSVNAAEDSHEEQDAQLSVNAAEDFSSKHTPHSSINTVPSAQLDSAVEDDTTGEPVQDQSNNTSVKFGSSGIDTSADSLEARDAQLLVKAIEDLASKYTSNSFINAETSAVEDNSDEVTRVTDVPLPVQDQSVNNLTKLTSPGTEASVDSGSRRYSLDGNWGSSSVISMISDAPAVLDGETLPSTGPQASTEASKSDVNIPRAAPADRQLSGKSETFELPSFTTLVEPSHVAASPNGATTASEIQNPQQSNSTSQAAWFPTLNQVINEPQGRKKNEETISKITKRSSSKEHTPLKSLLGEATNSSSNPKSPKMEENNKGSGLTTVNSILGPESPSAAQTAKEKAANEWNSPARYPANIKREKKKLKSRPFWIQLVCCSTVDPQRR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04508 927 MobiDBLite consensus disorder prediction 534 559 - -
Trre8g04508 927 ProSitePatterns Zinc finger C2H2 type domain signature. 18 38 IPR013087 -
Trre8g04508 927 MobiDBLite consensus disorder prediction 725 739 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 477 497 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 535 556 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 164 182 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 839 887 - -
Trre8g04508 927 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 210 922 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 162 182 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 590 611 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 812 833 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 720 756 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 774 811 - -
Trre8g04508 927 MobiDBLite consensus disorder prediction 774 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04508 Trre-Chr8 49211353 49215777 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre8g04508 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04508 - - tpra:123914238 1548.49