Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04455 ATGGGTTCTTTGGCTCACGTAAAACTCGCTTCATTAGCCACTTCTTTAAAAGCGAAGAGGCTAATGGCGCTGAGTCTAGGAGCCACACGCGTAGTTATAAGTAGCCATCCTGAAACTGCAAGAGAAATTCTATTTGGATCGTCGTTTTCTGATCGTCCGATCAAAGAATCAGCACGCTTGCTTATGTTTGAGCGTGCCATTGGTTTCGCTCCTTCTGGAAGCTATTGGAAAAAACTAAGAAGAATTGCAGCCTTTAATATGTTTTCTCCGAGGAGAATTCTCGGATTAGAGAATCTCCGGCAACGCGTGGCGGATGAAATGGTGGTTAAAGTTTGGAAGGAGATGGAGGAGAAAAGGGTGGTTGAAGTTAGAGGAATATTGCAAGAAGGGTCTTTTAGCAATATTTTGGAGAGTGTGTTTGGTTCCATTAGCAATTTTAATTGTTTGAGTTTAGGAGGAAGTGAGGAGTTGGGGAATATGGTTAAGGAAGGGTATGAGTTAATTGCTAAGTTTAATTTGGAAGATTATTTTTCTTCTAAATTTTTGGACTTCTATGGTGTGAAGAGAAAGTGTCATAAATTGGCGGCTAAGGTCACTAGTGTTGTTGGTCAAATGGTGGAGGAACGAAAAAGAGCTCAAGACTTGCTAATTGGGGAAAATGATTTTCTCAGCACTCTTCTATCTTTAGCCAAAGAGGAAAGGTTAGGTGATTCCGATATGGTGGCTATTTTGTGGGAAATGATATTTCGAGGAACAGATACAGTTGCTATACTCCTTGAATGGATCATGGCAAGGATGGTTTTACACCAAGACATACAAAAGAAAGCCCGCCAAGAGATTGACATGTGCATTGGCCCAAACAGTCATGTGCGAGACACAGACGTACCTAATCTCCCTTACCTGCAAGCTATAGTAAAGGAGGTGCTCCGACTACACCCACCGGGCCCATTATTATCTTGGGCCCGTCTTGCTGTCCAAGATATCCATGTCGATAAAACCCTAGTGCCAGCTGGTACAACTGCAATGGTAAACATGTGGGCTATATCTCATGACTCTTCTATATGGGAAGATCCCTTGACTTTTAAGCCTGAGCGGTTTCTAAAAGAAGATGTTTCTATTATGGGTTCAGATTTGAGGCTTGCACCTTTCGGTGCAGGCCGTAGGGTTTGCCCAGGAAGAGCTCTGGGCTTAGCCACAGTACATCTCTGGCTCGCACAACTTCTCCACAATTTTGTGTGGCTTCCGACACAACCTGTGGATCTTTCAGAAAGTCTTAAGCTTTCTCTCGAAATGAAGAATCCTCTGCGATGTTTAGTAGTTCGTCGTAATCCTCTGAACCCCATCATTTGA 1350 0.4319 MGSLAHVKLASLATSLKAKRLMALSLGATRVVISSHPETAREILFGSSFSDRPIKESARLLMFERAIGFAPSGSYWKKLRRIAAFNMFSPRRILGLENLRQRVADEMVVKVWKEMEEKRVVEVRGILQEGSFSNILESVFGSISNFNCLSLGGSEELGNMVKEGYELIAKFNLEDYFSSKFLDFYGVKRKCHKLAAKVTSVVGQMVEERKRAQDLLIGENDFLSTLLSLAKEERLGDSDMVAILWEMIFRGTDTVAILLEWIMARMVLHQDIQKKARQEIDMCIGPNSHVRDTDVPNLPYLQAIVKEVLRLHPPGPLLSWARLAVQDIHVDKTLVPAGTTAMVNMWAISHDSSIWEDPLTFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATVHLWLAQLLHNFVWLPTQPVDLSESLKLSLEMKNPLRCLVVRRNPLNPII 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04455 449 FunFam Cytochrome P450 78A5 1 442 - -
Trre8g04455 449 Pfam Cytochrome P450 20 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS E-class P450 group I signature 259 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS E-class P450 group I signature 390 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS E-class P450 group I signature 344 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS E-class P450 group I signature 15 34 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS E-class P450 group I signature 239 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS E-class P450 group I signature 380 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS E-class P450 group I signature 302 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS P450 superfamily signature 250 267 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS P450 superfamily signature 381 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 383 392 IPR017972 GO:0005506|GO:0016705
Trre8g04455 449 Gene3D Cytochrome P450 4 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 SUPERFAMILY Cytochrome P450 17 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04455 449 PANTHER CYTOCHROME P450 78A7-RELATED 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04455 Trre-Chr8 48825047 48826867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04455 2 443 Cytochrome P450 AT1G13710 55.902 5.68e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04455 - - gmx:100817944 694.501