Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04419 ATGGTACTACTTTCTAGAGAAACCATCAAACCTTCATCACCAACTCCTTCTCATCTTAGAATATATCCACTCTCTTTTATAGATAACATTTTTTACCGTAAATATGTGCCAGCACTTTTTCTTTACAACACAAAAGAGTCTAGTAACCTAAATTCTAAAATATCACAACTTCGTGAGTCCTTATCTCAAGTTCTATCCCAATACTACCCTTTTGCTGGCAAGTTGAAAGATAAAACAAGCATTGAATGTAATGATCAAGGTGTGTCATTTCTTGTCACAAAAGTCCAAAAAAAATTACCAGAGATTCTCCAAAATCCGACAGAAAAATTGTTGAATCCTTTGTTTCCCGAAGAATTACAATGGAAAGATATGGATTGGAATGGAACTTTAATAGTCATTCAAATCAATTGTTTTTCATGTGGAGGGATCGCGATAAGTATTTGCATGACTCACAAAGTTGGTGATGGTACCACTCTTTTCAACTTCATGAATGATTGGGCCATCATCAACAAAAAGATAGAGCAAGAAGAAGAAGGGTTATTAGTATTACCTGTCCCTTTACTCGGTAAAGGGGCTTCTATTTTTTCCCAGGGGGACTTACCTATTTTTCCCGAACTCGAGCTTGTGAAGGGAAACAAGGTGGTGTACAAAAGATTTGTGTTTCAAGCATCAATGATTAAGTCTCTCAAGACAATGGTAACTAATTCCGGGAATTCTCCCACGCGCGTACAAGTTGTAACTGCATTGATTTACAAGCGTGCAGTTTCAACAATGAGATTAAATTTCAAGATAGTGCCATTCAGCACGGTTGTGGACCTTCGCAGAAGAATGGTTCCTCCATTGTCAGAAAGGTGTGTAGGGAACATAATTTGGTTCTCGGCAACACACATAGATAAGAAGGAAATGGAGTTGCCGGATTTGGTATGCAAAATAAAACAAGGATTATCTGAGTTTTGTGATGTTTATCCGAAAGAGTTTGCAGGAAAAGAAAAGGAAAATTTATCGTTCATTTCCGAGAGCTTGCAACATGTTAACGATTCTTATTCCGATGATCAAACTATGCTTACTTTTAGTAGTTGGTGTGGATTTCCGATATATGAAGTAGATTTTGGGTGGGGAAAACCAACATGGGTGACCACTTTTGGTTGTTCATTGAGGAATGTAATATTTATGATGGATACAAGAGATGGGAATGGGATTGAAGCATTTGTGAACATGGAAGAGAGTGATATGGCTAGGTTTGAGAATGATGCAGAGCTTCTTAAGTATGCCTCTCTTAATCCAATGACCACAGCGCACACCCCACTCGCCCTCGCCAGAAAAGGCTTAACCGCTACTAACCACTGGCAGCACACCACTCCCCCACCGGCGATTGTTTTCAATTTCAGATGTAGATATTGTTGTACATGCATGAAGAATAGAGATGCTAGTGTTCATACACATGCTGATTTTCATTAG 1458 0.3861 MVLLSRETIKPSSPTPSHLRIYPLSFIDNIFYRKYVPALFLYNTKESSNLNSKISQLRESLSQVLSQYYPFAGKLKDKTSIECNDQGVSFLVTKVQKKLPEILQNPTEKLLNPLFPEELQWKDMDWNGTLIVIQINCFSCGGIAISICMTHKVGDGTTLFNFMNDWAIINKKIEQEEEGLLVLPVPLLGKGASIFSQGDLPIFPELELVKGNKVVYKRFVFQASMIKSLKTMVTNSGNSPTRVQVVTALIYKRAVSTMRLNFKIVPFSTVVDLRRRMVPPLSERCVGNIIWFSATHIDKKEMELPDLVCKIKQGLSEFCDVYPKEFAGKEKENLSFISESLQHVNDSYSDDQTMLTFSSWCGFPIYEVDFGWGKPTWVTTFGCSLRNVIFMMDTRDGNGIEAFVNMEESDMARFENDAELLKYASLNPMTTAHTPLALARKGLTATNHWQHTTPPPAIVFNFRCRYCCTCMKNRDASVHTHADFH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04419 485 PANTHER F21J9.9 3 425 - -
Trre8g04419 485 Gene3D - 211 424 IPR023213 -
Trre8g04419 485 Gene3D - 2 197 IPR023213 -
Trre8g04419 485 Pfam Transferase family 5 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04419 Trre-Chr8 48503051 48506370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04419 25 415 Monolignol Biosynthesis Gene Families AT5G48930 21.981 1.41e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04419 - - gmx:100806928 479.944