Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04417 ATGGAAATTGAAATAATATCAAGAGAATTCATCAAACCCTCATCACCTACTCCTCCTCACCTCAAAAAATTTCCAATCTCTTTTTTAGATCACATTACTTTCCGTAACTATGTGCCCCTACTTTTCTTTTACAATGATACCAAAGTTTGTGACCAAATGTCAAAAATCTCAAACCTCAAAAATTCCCTATCTAAAATTTTATCTATATACTACCCCTTTGCAGGTAGGTTTAAAGATCAACTTTCCATCGAATGTAACGATCAAGGTGTGTCATTTCTAGTCGCAAATATCATAGGAACAAAATTATCGACAATCCTCCAAAACCCAACCGAAAATTTGCTTAACCCTTTGTTTCCTGATGAATTACAATGGAAGAAAATGGATTGGAATGAAAGTATTTTAGTCATTCAGATCAATTGTTTTGCATGCGGAGGATTCGTAATAAGTGTTTGTGCTTGTCACAAAATTATAGATGTTGCAACCGCTTTCAATTTTATGAATGATTGGGCCAAATTGAATCGTGAAGAAGGAGATTCAAATTCAAAATTATCGTTACCCTACAATTTACTTTACGCCGGAGATATCATATTTCCACAAGGGGATTTGCCAAATTTTCCGGAAGGTGAGTTTGAAATAGACAAAACAATAGTGTGCAAAAGATTTGTGTTTGAAGCTTCTAAGATAAAATTACTTAAGAACATGGTAAATTACGATTTCCATGTGGTGGAAAATCCCACGCGTGTAGAAGTTGTCACATCACTGATTTACAAGTGTGTGGTTAATGCATTGGGATTAAATTACAAAACAACATCGCTTCGCATGGCTGTAGATCTTCGCAAAAGAATGGTTCCTCCATTATCTGAAAAGTGTGTAGGAAACTTAGTTTGGTTTTTATTTGTTATGAACCCGGAATTACATGACTTGGTATTCAAAATTAGGAAAGGGTTGTGTGAGTTTCGCGAGGTTTATCCAAAGAAATTTGGAGGGAAAGAAAAAGACTTATCATTTATTTTTGAATGTTTAAAACAAGTTACTACTTCATTTTCAGAGAGTAATTATGATGATCAAAGTTTGATTCTTTATGCTAGTTGGTGTAAGTTTCCAATGTATGAAGCTGATTTTGGATGGGGGAAACCAATATGGGTGACAACTAGTACTTGTCCTGTGAAAAATGCGATAGTTTTGATGGATACAAGAGATGGAGATGGAATTGAAGCGATTGTGAATATGAAAGAGAATGATATGATTATGTTTGAACATAATGTGGAACTTCTTCAATATGTCTCTCTGAATCCTAGCATTCTTGAACATGATGTAGCTAATGGATTCTAA 1332 0.3431 MEIEIISREFIKPSSPTPPHLKKFPISFLDHITFRNYVPLLFFYNDTKVCDQMSKISNLKNSLSKILSIYYPFAGRFKDQLSIECNDQGVSFLVANIIGTKLSTILQNPTENLLNPLFPDELQWKKMDWNESILVIQINCFACGGFVISVCACHKIIDVATAFNFMNDWAKLNREEGDSNSKLSLPYNLLYAGDIIFPQGDLPNFPEGEFEIDKTIVCKRFVFEASKIKLLKNMVNYDFHVVENPTRVEVVTSLIYKCVVNALGLNYKTTSLRMAVDLRKRMVPPLSEKCVGNLVWFLFVMNPELHDLVFKIRKGLCEFREVYPKKFGGKEKDLSFIFECLKQVTTSFSESNYDDQSLILYASWCKFPMYEADFGWGKPIWVTTSTCPVKNAIVLMDTRDGDGIEAIVNMKENDMIMFEHNVELLQYVSLNPSILEHDVANGF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04417 443 Gene3D - 213 429 IPR023213 -
Trre8g04417 443 Gene3D - 1 200 IPR023213 -
Trre8g04417 443 PANTHER F21J9.9 4 429 - -
Trre8g04417 443 Pfam Transferase family 1 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04417 Trre-Chr8 48493613 48494944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04417 1 419 Monolignol Biosynthesis Gene Families AT5G48930 24.569 9.11e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04417 - - gmx:100806928 516.924