Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04407 ATGTTTTTTCAGAAACTTACAAAGTCTTATTCTCATATTTGGCTTCCATTGTTGCTGATTCTACTAACAAGTGTTTCAGTTAATGGTGTTGAACAAAAGAATTTTTACATTGTTTTCCTAGGAGCTCATGCTGTTAGTAGAGAAAAAGCAGTAGAGAGTCATTTAAATATTCTCTCATCTGTTAAACTAAGCCATGTTGAAGCCAAAGAATCCATAGTGTACAGCTATACAAAGAGCTTTAATGCATTTGCTGCTAAACTGTCGAAGGATGAGGCCAACAAGTTATCTGACATGAATGAAGTGCTCTCCGTACTTCCGAATCAGTATCGAAAACTACACACAACAAGATCATGGGACTTCATTGGATTACCTTTGACAGCTAAGAGAAAACTGAAACAAGAGAGTGACACAATTGTGGCTCTTATGGATACAGGGATTACGCCTGAGTTTCGAAGCTTCAACGACGATGGATTTGGTCCTCCGCCGTCTAAATGGAAAGGAAGTTGTGATAAATTTGTTAATTTCTCAGGCTGCAATAACAAGATAATTGGAGCAAAATACTTCAAACTTGATGGAAGATCTGAACAATCTGATATATTATCTCCTATAGATGTGTCGGGGCATGGAACTCATACAGCATCAACAGCAGCAGGTAGTCTCGTCCCAAATGCGAGTCTCTTTGGATTAGCAAACGGGACTGCTCGCGGAGCGGTGCCTTCGGCAAGGTTAGCAATTTACAAAGTGTGCTGGAAAGAGGATGGATGTGCTGATATGGATGTACTTGCTGCATTCGAGGCTGCTATACATGATGGTGTGGATGTCATATCCATTTCCTTAGGTGGAGAAGATTCAAATTATATAAAGGACCCTATATCGATTGGTGCATTTCATGCCATGAGGAAAGGTATAATCACTGTCGCCTCGGCTGGAAATGATGGTCCAACTATGGCAACTGTCGTAAATAATGCGCCGTGGGTTGTCACGGTAGCGGCTAGTGGCATTGATAGGGACTTCCATAGCACTGTAGAGTTGGGGACAAGAACAAATGTTTCTGGAGAAGGAGTAAACATCTTTAGTCCAAAGCAAAAACAGTATCCCCTTGTTAATGGGAAGGATGCGGCGCGAGTCTCTTCAAGCAAGGAAAATGCGAAGTTCTGCGCCAAAGGCTCTTTAGAACCAAATAAAGTTAAAGGAAAGATTGTATACTGTAAATTTAGAACATGGAGCACAGAAGCTGTTGTGAAAGCAATAGGAGGCATTGGTACTATAGTTGAATATGATGAATTTGAAGATGTTCCTGAAACATTCATGGCTCCTGCTACATTTGTGAATAGAAGCACTGGTCAAACTATTACAAATTATATACAATCTACAAGATCACCATCAGCAGTGATACATAAAAGCCATGAAGTGAAAATACCAGCTCCATTTGTTGCTTCTTTTTCATCTAGGGGTCCAAATTTAGGATCTCAACATGTTCTCAAGCCTGATATAACAGCTCCTGGCATTAGCATTTTGGCAGCATATACACTTAGGCAATCAATTGCTAGTTTAGAAGGGGACACCAAATTTTCAGAATTTACACTAATGTCTGGTACTTCCATGTCATGCCCTCATGTTTCTGGAATAGCAGCATATGTGAAGTCATTTCACCCAAATTGGACCCCTGCTGCAATCAGATCAGCTATAATGACCACAGCTAAACCTATGAGCCAGAAATTCAACAAGGAGGCAGAGTTTGCTTTTGGTGCTGGTCAAGTTAACCCAACAAGAGCTCTAAATCCTGGCTTAATCTATGACATGGATGAACTTGGTTATGTTCAGTTCTTATGCCATGAAGGATATAATGGTACCACTTTATCAATATTAATTGGTTCTCCTATAAATTGCAGTTCTTTGGTTCCTGGATTTGGTCATGATGCTATTAACTATCCAAGCATGCAATTAAGTGTGAAAAACAACACAGAATCAACAATAGGAGTATTCAGTAGAACAGTTACAAATGTAGGTCCTGCATCAACTGTGTATAATGCTACCATTAAATCTCCAAAAGGAGTGGAAATTACAGTGAAACCTACTAGCCTTATTTTCTCTCATACAATGCAGAAGAAGAGCTTTAAGGTGGTGGTGAAAGCAAAGTCTGTGATAAACATGAAAATTTTATCAGGTTCACTTATTTGGAGAAGTCCTCGTTACATTGTTAGAAGTCCTATTGTAATCTATAGTCCATAA 2232 0.3947 MFFQKLTKSYSHIWLPLLLILLTSVSVNGVEQKNFYIVFLGAHAVSREKAVESHLNILSSVKLSHVEAKESIVYSYTKSFNAFAAKLSKDEANKLSDMNEVLSVLPNQYRKLHTTRSWDFIGLPLTAKRKLKQESDTIVALMDTGITPEFRSFNDDGFGPPPSKWKGSCDKFVNFSGCNNKIIGAKYFKLDGRSEQSDILSPIDVSGHGTHTASTAAGSLVPNASLFGLANGTARGAVPSARLAIYKVCWKEDGCADMDVLAAFEAAIHDGVDVISISLGGEDSNYIKDPISIGAFHAMRKGIITVASAGNDGPTMATVVNNAPWVVTVAASGIDRDFHSTVELGTRTNVSGEGVNIFSPKQKQYPLVNGKDAARVSSSKENAKFCAKGSLEPNKVKGKIVYCKFRTWSTEAVVKAIGGIGTIVEYDEFEDVPETFMAPATFVNRSTGQTITNYIQSTRSPSAVIHKSHEVKIPAPFVASFSSRGPNLGSQHVLKPDITAPGISILAAYTLRQSIASLEGDTKFSEFTLMSGTSMSCPHVSGIAAYVKSFHPNWTPAAIRSAIMTTAKPMSQKFNKEAEFAFGAGQVNPTRALNPGLIYDMDELGYVQFLCHEGYNGTTLSILIGSPINCSSLVPGFGHDAINYPSMQLSVKNNTESTIGVFSRTVTNVGPASTVYNATIKSPKGVEITVKPTSLIFSHTMQKKSFKVVVKAKSVINMKILSGSLIWRSPRYIVRSPIVIYSP 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04407 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Trre8g04407 743 CDD Peptidases_S8_3 111 567 IPR034197 -
Trre8g04407 743 Pfam Fibronectin type-III domain 642 740 IPR041469 -
Trre8g04407 743 ProSiteProfiles Serine proteases, subtilase domain profile. 117 593 - -
Trre8g04407 743 SUPERFAMILY Subtilisin-like 112 597 IPR036852 GO:0004252|GO:0006508
Trre8g04407 743 Gene3D - 610 742 - -
Trre8g04407 743 Gene3D Peptidase S8/S53 domain 136 604 IPR036852 GO:0004252|GO:0006508
Trre8g04407 743 Gene3D - 335 471 - -
Trre8g04407 743 Pfam Peptidase inhibitor I9 36 113 IPR010259 -
Trre8g04407 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 113 IPR037045 -
Trre8g04407 743 Pfam Subtilase family 135 585 IPR000209 GO:0006508|GO:0008236
Trre8g04407 743 CDD PA_subtilisin_like 341 465 - -
Trre8g04407 743 FunFam Subtilisin-like protease SBT5.3 25 113 - -
Trre8g04407 743 FunFam Subtilisin-like protease SBT1.5 136 361 - -
Trre8g04407 743 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Trre8g04407 743 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Trre8g04407 743 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Trre8g04407 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 65 739 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04407 Trre-Chr8 48440667 48444491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04407 33 581 Subtilisin-like Serine Gene Family AT4G00230 61.749 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04407 - - ccaj:109800351 1187.17