Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04361 ATGAGGAAGAATTTGAACTTGGAACTTCGTCTTTTCCCTCTCTCAAATTCCGATCTTTGTTCCACAATGAAAGAACAAGAAGAAGAAGAAGAAGTAGCAGAAAGCAGTGAGAGTCCAGTACTACAAGATCAACAACACCGGCCGTTGACCATTCTCTATGATGGCAAAATTTGCGTTCATGATGCCACAGAGATTCAGGCTAGATCAATTTTAATGCTTGCAAATAAAGAAATGGAGGAAAGAGTGAGGACACCAACTGGAGGAGCATCATCAGAGCCATCTTCACCATCAGTATTTAACTTGTATAGCCCTGGCACTTCTCCTTCCATGAAAAAATCACTGCAGAGGTTTCTCCAAAAGAGGAAGAATCGGATCCAAGAAGCATCCCCTTACCATCTTAAGATAAATCATTAA 414 0.4082 MRKNLNLELRLFPLSNSDLCSTMKEQEEEEEVAESSESPVLQDQQHRPLTILYDGKICVHDATEIQARSILMLANKEMEERVRTPTGGASSEPSSPSVFNLYSPGTSPSMKKSLQRFLQKRKNRIQEASPYHLKINH 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04361 137 MobiDBLite consensus disorder prediction 27 46 - -
Trre8g04361 137 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 22 132 IPR040390 -
Trre8g04361 137 ProSiteProfiles Tify domain profile. 42 76 IPR010399 -
Trre8g04361 137 MobiDBLite consensus disorder prediction 81 110 - -
Trre8g04361 137 MobiDBLite consensus disorder prediction 87 110 - -
Trre8g04361 137 Pfam tify domain 44 75 IPR010399 -
Trre8g04361 137 Pfam Jas motif 111 131 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04361 Trre-Chr8 48052305 48054732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04361 1 132 Tify Gene Family AT1G30135 42.537 3.48e-23 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Trre8g04361 tify 9.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04361 - - gmx:100305565 152.525