Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04356 ATGAAGAGAGAGCATAAGCAAGAACACGAAGATGCTACTATGAGTAGTAAATCAGAGATTTGTTGGGAGGACGACGGTGGTATGGATGAACTCTTAGCAGTTGTTGGTTACAAAGTGAAATCATCAGACATGGCTGAAGTTGCTCAAAAGCTTGAACAACTTGAACAAGCTATGGGTAATTTTCAAGACCAAGATGAATCAACCATCGCTCAACAGCTCTCAAACGACACCGTTCATTACAATCCTTCTGATATTTCCAACTGGCTTCAAACTATGCTTTTCAATTTTGACCCTCAACCTAATCCAACCGTTTCATCTTCCTCCGATAATGACCTCAACGCCATTCCCGGTAAAGCTATTTACGCCAACACTGTTGTAACTGTCTCACAACAACCACAACCACAACAACAAGATGATGTCGATGATGATGTTGATTTTCCTTCTCGGAAACGAGTTAAACGAACTGATTCCACCGAGTCAACTCGTCCTGTAATGGTGGTTGAAACGCAAGAAAAAGGGATTCGTCTTGTTCACACTTTAATGGCTTGTGCTGAAGCAGTTGAACAGAACAATCTAACGGTAGCGGAAGCTTTGGTGAAACAGATCGGTTACTTAGCGGTGTCGCAAGAAGGTGCTATGAGAAAAGTTGCTACGTATTTCGCTGAAGGTTTAGCTCGACGAATCTACGGTGTGTTTCCACAGCATTCCGTTTCCGATTCGCTTCAGATCCATTTCTATGAAACTTGTCCTTATTTGAAATTCGCTCATTTCACTGCGAATCAAGCTATTCTTGAAGCTTTTCAAGGAAAATCTAGGGTTCATGTTATTGATTTCTCGATCAATCAAGGGATGCAGTGGCCGGCGCTTATGCAGGCACTTGCGTTACGTCCTGGTGGTCCACCTGCTTTTCGTCTTACCGGAATTGGTCCTCCGGCGTCGGATAATTCCGATCATCTTCAACAGGTTGGTTGGAGACTTGCTCAGTTTGCTCAAACGATTCATGTTCAGTTTGAGTATCGTGGTTTTGTTGCTAATAGTCTTGCTGATCTTGATGCTTCTATGCTTGAACTCCGTTCACCGGAAACTGAATCTGTTGCTGTTAACTCTGTTTTTGAGCTTCATAAACTCAACGCGCGTCCAGGTGCGCTTGAGAAAGTTTTTTCTGTTATCCGTCAGATTCGGCCGGAGATTGTTACCGTTGTTGAACAAGAAGGGAATCATAACGGACCGGCTTTTCTAGACCGGTTTACTGAGTCACTTCATTATTACTCGACTCTATTTGACTCGCTTGAAGGTTCATTGGTCGAACCGCAAGACAAGGCTATGTCGGAGGTTTATTTAGGGAAACAAATCTGCAACGTGGTGGCATGTGAAGGAACGGACCGGGTTGAACGTCATGAGACTTTGAACCAGTGGAGGAACCGGTTCGGTTCAGCTGGATTTTCACCGGTTCATTTGGGTTCAAACGCGTTCAAGCAAGCGAGTATGTTGTTAGCACTTTTCGCTGGTGGGGATGGTTACAAGGTGGAAGAGAATGATGGTTGTCTCATGCTTGGTTGGCACACTAGACCTTTGATTGCTACATCTGCTTGGAAACTCGCCGCCGTTAACTCAGTGGTGGTTTCACACTGA 1632 0.4442 MKREHKQEHEDATMSSKSEICWEDDGGMDELLAVVGYKVKSSDMAEVAQKLEQLEQAMGNFQDQDESTIAQQLSNDTVHYNPSDISNWLQTMLFNFDPQPNPTVSSSSDNDLNAIPGKAIYANTVVTVSQQPQPQQQDDVDDDVDFPSRKRVKRTDSTESTRPVMVVETQEKGIRLVHTLMACAEAVEQNNLTVAEALVKQIGYLAVSQEGAMRKVATYFAEGLARRIYGVFPQHSVSDSLQIHFYETCPYLKFAHFTANQAILEAFQGKSRVHVIDFSINQGMQWPALMQALALRPGGPPAFRLTGIGPPASDNSDHLQQVGWRLAQFAQTIHVQFEYRGFVANSLADLDASMLELRSPETESVAVNSVFELHKLNARPGALEKVFSVIRQIRPEIVTVVEQEGNHNGPAFLDRFTESLHYYSTLFDSLEGSLVEPQDKAMSEVYLGKQICNVVACEGTDRVERHETLNQWRNRFGSAGFSPVHLGSNAFKQASMLLALFAGGDGYKVEENDGCLMLGWHTRPLIATSAWKLAAVNSVVVSH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04356 543 MobiDBLite consensus disorder prediction 1 21 - -
Trre8g04356 543 Pfam GRAS domain family 176 532 IPR005202 -
Trre8g04356 543 FunFam DELLA protein GAI 27 96 - -
Trre8g04356 543 MobiDBLite consensus disorder prediction 142 158 - -
Trre8g04356 543 Pfam Transcriptional regulator DELLA protein N terminal 29 100 IPR021914 -
Trre8g04356 543 Gene3D - 27 96 IPR038088 -
Trre8g04356 543 ProSiteProfiles GRAS family profile. 167 532 IPR005202 -
Trre8g04356 543 Coils Coil 37 64 - -
Trre8g04356 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 123 528 IPR005202 -
Trre8g04356 543 SMART DELLA_2 29 106 - -
Trre8g04356 543 MobiDBLite consensus disorder prediction 129 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04356 Trre-Chr8 47967141 47968772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04356 23 534 GRAS Transcription Factor Family AT1G14920 69.011 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre8g04356 GRAS 7.8e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04356 K14494 - gmx:547718 790.801