Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04348 ATGTCAGAGATGTGGCTTAATCTGAAGAGATCATTACATTGCAAACCTCAATCATCAGAGGTTTATGATCCAAAGGCAAATAAGCACCATAAAATAAAAAACAACAAAGACAAAAGTGTCAAAATTTGCATAAATGGTCCCATGCTTAACCATGTTACTCATGAAATTGTTTTTGATAGCAAAAGTGGTGAGATTAAATGTTATCCTTGTTTTCAAAACATTGAAGTTCCTCCTCCTTCTCATAGATCAACTAAGGGAACCACAACTTCAACAAAATCACATTGTGTTGATTGTGATGAATGTTTTATTTTCTCAAAGTCAAAGGTGACAATTGTGAAAGATTCTAATGATTTCTTTTCGAGTATAACTTTTCCTCTTGCCACCATTGAAGAACATGATATCTCTGAGCATTCAGTGATCAATCTTCATAGACAAGATTCATCTTGGCAAATTATCAAAAAAATATGTGAAATTAACAATGAGAATGGTGAAAGCAAAGCAATATTACAAATTGAATATATCTTGAAAGTCCAAAACATGCAAGAGACATATGCAAGCTTTGAGGAATTTAGAGAATTTACAAAAATTAATGCTGAAAAGCTACAAATTAAGCACCCTAGGTGTTTAGTTGATGGAAATGAGATGTTAAGGTTTCATGGTACAACCATTGCATGTTCCCTTGGTATAAATGGTTCTTCTAATCCATGCACTTTAGACCAATGTGGTTTATGCCAAATTTTGAGGCTTGGTTTCTCTGCCAACCAAAAATTTCAGGATACTATTGGTGTTTTCACATCTTCTACATGTGGAAAAGCTATTGATTCTATTAAGTCTTTCAATAAACCATTTATGAGAAAATGTGTTATAGTGTGTAGGGTGATAGCTGGGAGAATCAACAATCCTTTGCAAGAGATTCAAGAAATGAGCTATTCAGGTTATGATTCTTTGGTTAAAAATATAAATTGTCAATTAGATATTGAAGAACTTATTATTTTAAATCCTAGAGGTGTTCTCCCTTGTTTTGTGGTAATGTACAAATTATGA 1044 0.3247 MSEMWLNLKRSLHCKPQSSEVYDPKANKHHKIKNNKDKSVKICINGPMLNHVTHEIVFDSKSGEIKCYPCFQNIEVPPPSHRSTKGTTTSTKSHCVDCDECFIFSKSKVTIVKDSNDFFSSITFPLATIEEHDISEHSVINLHRQDSSWQIIKKICEINNENGESKAILQIEYILKVQNMQETYASFEEFREFTKINAEKLQIKHPRCLVDGNEMLRFHGTTIACSLGINGSSNPCTLDQCGLCQILRLGFSANQKFQDTIGVFTSSTCGKAIDSIKSFNKPFMRKCVIVCRVIAGRINNPLQEIQEMSYSGYDSLVKNINCQLDIEELIILNPRGVLPCFVVMYKL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04348 347 Gene3D - 138 346 - -
Trre8g04348 347 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 345 - -
Trre8g04348 347 SUPERFAMILY ADP-ribosylation 139 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04348 Trre-Chr8 47887066 47888733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04348 126 346 C2H2 Transcription Factor Family AT5G54630 47.826 5.37e-68 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04348 - - cam:105851073 442.965