Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04341 ATGGACGCAGAATCTGTAGATAAGAGGGAGCAGCTTGATTGGAAACGTAGGTTTGGGATAATCACAGGCGTGGCAAAGGGATTACTTTATCTCCACGAAGACTCGCACCATTGCATAATCCATAGAGACATCAAAGCCAGTAACGTATTGCTTGATGACAAATGGACGCCCAAGATTGCTGATTTTGGAATGGCACGTCTCTTCCCCGAAGATCAAAGCCAAGTCAATACACGTGTGGCTGGAACCAATGGATATATGGCTCCTGAATATATGATGCATGGAAGACTTTCTGTCAAGGCTGACGTGTTTAGCTATGGGGTTTTGCTATTGGAGTTGATCACCGGCCAACGAAACTCTTCCTTTAATTTGGATGTGGAGCACCATAGCCTTCTCGATTGGGCATACAAGATGTACAAGAAAGGGAGGAGCTTAGAAATTGTAGATTCTACATTGGCATCTACAGTGTTAACAGAACAAGTAGCTATGTGCATTCAGCTTGCTCTGCTATGCACTCAAGGAGATCCACATCTACGTCCGACAATGAGACGAGTAGTGGTTATGCTATCAAGAAAATCACCACAAAGCCACATGGAAGAACCAACAAGACCAGGAGTACCAGGTAGCAGATATAGAAGACCTCCTGGACATTCTGGTTTGTCTTCTACAGTTGGTAGTGGTGCGTCTTATTCTCGATCTTTTGATTCAAGCAACAACTGTACCACGCATACAAACACTGCAACTGGTACAAGTTCAGCTACTGCTGAATTAGATATTAGAGGGAAACGTCCAATGCAAGATTAG 801 0.4395 MDAESVDKREQLDWKRRFGIITGVAKGLLYLHEDSHHCIIHRDIKASNVLLDDKWTPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYMMHGRLSVKADVFSYGVLLLELITGQRNSSFNLDVEHHSLLDWAYKMYKKGRSLEIVDSTLASTVLTEQVAMCIQLALLCTQGDPHLRPTMRRVVVMLSRKSPQSHMEEPTRPGVPGSRYRRPPGHSGLSSTVGSGASYSRSFDSSNNCTTHTNTATGTSSATAELDIRGKRPMQD 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04341 266 Gene3D Transferase(Phosphotransferase) domain 1 4 202 - -
Trre8g04341 266 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Trre8g04341 266 SUPERFAMILY Protein kinase-like (PK-like) 8 190 IPR011009 -
Trre8g04341 266 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 243 - -
Trre8g04341 266 SMART serkin_6 4 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04341 266 Pfam Protein kinase domain 19 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04341 266 MobiDBLite consensus disorder prediction 218 254 - -
Trre8g04341 266 FunFam Cysteine-rich receptor-like protein kinase 2 3 196 - -
Trre8g04341 266 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g04341 266 MobiDBLite consensus disorder prediction 190 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04341 Trre-Chr8 47822465 47823732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04341 8 204 Receptor kinase-like Gene Family AT4G11530 50.754 3.11e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre8g04341 Pkinase 1.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04341 - - gmx:100795769 413.305