Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04328 ATGGCTTCTTATAGTACCTCAGTTTTGGCTCACTTGTTTGGCATTATTGCCATCATTCTTATGCTTGTTTGGTTGTTGCATTACCAAGGGGGGATTGAATATGATTCTAGTAATCCACTTCGTGTTTTCAATGTTCACCCTTTTCTTATGTTCTTTGGGTTCATTTTCCTTGTTGGTCAAGCGATAATGTCTTACCACACAGTACCAGGCACACATGAAACACAGAAGACTATTCACATGACTCTTCATTTCATTGCTATAGTTCTTGGAATTGTTGGTATATGTGCTGTTTTCAAGTTCCATGATATGGTGAACTTGGTTGATGTTTACAGCCTCCATTCATGGATTGGCCTTGGCACCTTTTGCTTGTTTGGCTTGCAGTGGCTTTTTGGATTGACATTCATGTTTCAAGGAACTAGACAATCAAGGGCAGCAATGGCTCCATGGCACATAGCTGGTGGTAGAGCACTATTTTACATGGCAATTTGTGCTGCACTAACAGGCTTGATGGAGAGAACTGCTATGTTAAAGTTACTTCCACACCAAAGAGAATCTCATTTGATCAATTTCACTGGTCTAGCAATTCTCTTGTTTGGAGTTTTTGTGGATATGACAGTTGGTTTGGCCCATATTGCTTGA 639 0.4022 MASYSTSVLAHLFGIIAIILMLVWLLHYQGGIEYDSSNPLRVFNVHPFLMFFGFIFLVGQAIMSYHTVPGTHETQKTIHMTLHFIAIVLGIVGICAVFKFHDMVNLVDVYSLHSWIGLGTFCLFGLQWLFGLTFMFQGTRQSRAAMAPWHIAGGRALFYMAICAALTGLMERTAMLKLLPHQRESHLINFTGLAILLFGVFVDMTVGLAHIA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04328 212 Gene3D - 1 209 - -
Trre8g04328 212 ProSiteProfiles Cytochrome b561 domain profile. 9 207 IPR006593 -
Trre8g04328 212 Pfam Eukaryotic cytochrome b561 45 173 IPR006593 -
Trre8g04328 212 FunFam Probable transmembrane ascorbate ferrireductase 3 1 210 - -
Trre8g04328 212 PANTHER CYTOCHROME B561-RELATED 4 206 IPR043205 GO:0016491
Trre8g04328 212 CDD Cyt_b561_ACYB-1_like 36 177 - -
Trre8g04328 212 SMART 561_7 45 169 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04328 Trre-Chr8 47735544 47737547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04328 6 210 Chloroplast and Mitochondria Gene Families AT1G14730 61.353 3.33e-86 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04328 K08360 - gmx:100305990 352.829