Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04234 ATGCGCTGTTTTTGTTCTTCTTGGCGAAGGCGGCGAAGCCGAGAACCTTCAGCATGTGCTCCGGGTTTAAAAACAGTTAACAATAGAGGACTTTGTGCCATTTCTCAGGCTGAGTCTCTTCGTTTCAAGCTTCTTGGTGGTCTTGCTCTGCGCAGGTATTTTGATTCAGTTTCTTTTAGGATGTATGACTTGAATGATGATAGCTTTATAGAGTGGGAAGAGGTCGGGCAAATGATTACTGAATATCTAGGGGGTGACCAGCTTTTCCAGGTTCTAAGCAAGCCCGAGGAAGCACTGAAGCTCTTGCAGAAGGCGGTGAAGCTATTGAAGGGTATCCCTGGACAATATAGGACAATTGCAGGAATAAAAGCTCGGATGGGACAATTACAGATATATTATTTGTTACCACCTGGTGTTGAAAGAATGGAAAGGTTGTGA 438 0.4429 MRCFCSSWRRRRSREPSACAPGLKTVNNRGLCAISQAESLRFKLLGGLALRRYFDSVSFRMYDLNDDSFIEWEEVGQMITEYLGGDQLFQVLSKPEEALKLLQKAVKLLKGIPGQYRTIAGIKARMGQLQIYYLLPPGVERMERL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04234 145 ProSiteProfiles EF-hand calcium-binding domain profile. 59 85 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04234 Trre-Chr8 46925006 46926951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04234 26 52 Cytoplasmic Ribosomal Protein Gene Family AT2G31610 88.889 5.64e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04234 K02985 - cam:101489796 56.9954