Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04229 ATGGGGATCCTTTCCTTGTTCTTCTACTCTCTCTTTTATCTTTCAATATTTTTCATCATAAGGCTTTTGTTCCAATCAAGAAAATTCAAAAACCTCCCACCAGGTCCGACTTCTCTTCCCATAATAGGTGACCTCCACCATCTCAAACGCCCCCTCCACCGTACTTTTAAGGGACTCACCGAGAAGTATGGCAACGTAATTTCCCTTTGGTTTGGATCACGTCTTGTCGTTGTTGTATCTTCTCTATCGGAATTTCAACAATGTTTTACAAAAAACGACGTTGTCCTAGCAAATAGACCAAAGTTTTTATCAGGAAAATATATTTTCTACAATTATACAACCTTAGGATCTACAGCTTACGGAGAACACTGGCGCAACCTTCGTCGTATTACTTCTCTTGATGTTCTTTCAAACCATCGGATCAACAATTTTGCTGGAATCCGAAGGGACGAGACTCAAAGATTGATCACCAAGTTGGCTGAAGATTCATCCACTGATTTTGCTGAAGTAGAACTCACTTTTCGATTCTTTGATATGACCTTTAACAATATCATGAGAATGATCTCTGGAAGGAGGTACTATGGAGAAGATTGTGATATGTCTGATCTTCAAGAAGCAAGTCAATTTAGAGATATGGTATCTCAATTGTTGCAGTTATCAGGAGCGAATAATAAGACCGATTTCATGCCTTTGCTTAAGTTTCTTGATTTTGAAAACTTGGAGAAGAGAGTCAAACATATTGGTGAAAAATGTGATGAGTTCTTGAGGGGACTCCTTGAAGAGCAACGTAACAAGAAGGAACGTACAAATACTATGATAGATCATCTCTTAAATATGCAAGAATCACAGCCAGAGTACTACACCGATCAAATCATCAAAGGTCTCGCTTTGGCCATGCTTCTTGCTGGAACTGATTCATCAGCTGTAACTTTAGAGTGGTCGATGTCTAACATTTTGAACCATCCAGAAGTATTGCAAAAGACCCTGAAACATGGAGTGAAGCCACAACTTTCAAACCAGAGAGGTGATGGCAAAATTGATATGTCAGAGCGAGATGGTTTCACCTTGACAAAATTGGTGCCACTAAAGGCCATGTGTAAAACTCGTCCTGTCATCAACAAGCTTCTCAATCTTTTCATTTCCGGAGGGAGCAAAAGAGTTCAAGGGTTGCTTGCCTATTGGTCATATTTTGCCTTTCAATGA 1203 0.3957 MGILSLFFYSLFYLSIFFIIRLLFQSRKFKNLPPGPTSLPIIGDLHHLKRPLHRTFKGLTEKYGNVISLWFGSRLVVVVSSLSEFQQCFTKNDVVLANRPKFLSGKYIFYNYTTLGSTAYGEHWRNLRRITSLDVLSNHRINNFAGIRRDETQRLITKLAEDSSTDFAEVELTFRFFDMTFNNIMRMISGRRYYGEDCDMSDLQEASQFRDMVSQLLQLSGANNKTDFMPLLKFLDFENLEKRVKHIGEKCDEFLRGLLEEQRNKKERTNTMIDHLLNMQESQPEYYTDQIIKGLALAMLLAGTDSSAVTLEWSMSNILNHPEVLQKTLKHGVKPQLSNQRGDGKIDMSERDGFTLTKLVPLKAMCKTRPVINKLLNLFISGGSKRVQGLLAYWSYFAFQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04229 400 Coils Coil 259 279 - -
Trre8g04229 400 SUPERFAMILY Cytochrome P450 33 329 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04229 400 Gene3D Cytochrome P450 21 360 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04229 400 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04229 400 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04229 400 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04229 400 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04229 400 PANTHER CYTOCHROME P450 82C3-RELATED 15 328 - -
Trre8g04229 400 Pfam Cytochrome P450 33 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04229 Trre-Chr8 46880511 46883005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04229 10 328 Cytochrome P450 AT4G37370 49.538 1.67e-112 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04229 K13260 - ag:BAA22422 544.273