Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04228 ATGGTAATGGACCCTTTATTATATTACTCACTCCTTTCCCTTAGTTTCATTTTAACCTTGAAACTTTTACTCCAAAAAAGAAATTCAAAAAACCTTCCACCAAGTCCATTAACTCTTCCCATAATAGGAAACTTTCACAACATAGACCTCCCACTTCACCGTTCCCTTCAAAACCTTTCACAAAAATACGGCAACATCTTCACCCTATGGCTCGGTTCACGGCGTGTCGTTGTTATCTCTTCCCAAACCCTAATTCAACAATGTTTAACCAAACACGACATTGTTTTATCAAACCGAGCCCGCTTTCTCACTGGAAAACATCTCTTCTACAATTATACTAGCTTACTCTCCGCTCCTCATGGTGACCACTCGCGTAACATTCGTCGAATCATCACGAATGATGTTCTCTCAACAGAACGTCTCAAGTCTTTTGCTGAAATGCGAAGGAAAGAGACGTTGAAGTTTATAACAAAACTAGCTAAGGACACGTGTGAGGAGTTCACACGTGTCGAGCTGAGAACTAGACTAACGAATATGACGTTCGAGATTATGACTAGAATGGTTGCTGGTGATGCTAAGGAAATGAAGAAGTTTAAAGATATGATAAATGAAATGATGCCATTGCTTGGGGCAAATAATATGGGAGATTTTGTGCCTTTAATTAGGTTCTTTGATTTTGGTGGTTTGGTTAAGAGGATGAAGGATGTTGCCAAGAAAGGTAATTTGTTTTTGCAAGGAATTATTGATGAGATTAGAAGTGAGAGGAATGGTGGTAATAACATGTTACAACATCTTTTGACTCTACAAAAATCTCAACCTGAGTATTACTCCGATGTAATTATCAAAGGGATTATTCAGGGTATGTTTCTTGCTGGAACTGACACATCAGCTATGACCTTAGAGTGGGCAATGTCTGCTTTATTGAATCACCCACATATATTGAAGAAAGCAAAAGATGAAATAGATACTCAAATAGGATATGATCGTTTAGTAGATGAGTCAGACATTTCAAATCTTCCATACCTTCAAAATATTATCTACGAAACACTTCGGTTTTACCCAGTTGCTCCGTTACTATTGCCTCGTTTTACTTCAGACAAGTTCATTATCGAAGGATTTACTATTCCACGTGACACCATAGTGATGATTAATGGATGGGCGATTCAAAGAGATCCCAAAACTTGGAGTGATGCTTCATGTTTTAAGCCAGAGAGATTTGAAATAGAAGGCGAAGCAAACAAGTTAATTGCATTTGGTTTTGGAAGGAGGGCTTGTCCTGGATTAGGTTTGGCACATCGCACTATGGGCTTGAGTTTGGGATTATTGATTCAGTGCTTTGAATGGAAACGATTAACTCAAGAAAAAGTGGATATGACAGAAAGTAAAATAGGGCTCGTCATGGAAAAGCTCAACCCCTTGGAAACAATGTGTAAAGCAAGACCAATCATCAAGAAAGTTATCCAAGAATTGAATATCTAG 1479 0.3827 MVMDPLLYYSLLSLSFILTLKLLLQKRNSKNLPPSPLTLPIIGNFHNIDLPLHRSLQNLSQKYGNIFTLWLGSRRVVVISSQTLIQQCLTKHDIVLSNRARFLTGKHLFYNYTSLLSAPHGDHSRNIRRIITNDVLSTERLKSFAEMRRKETLKFITKLAKDTCEEFTRVELRTRLTNMTFEIMTRMVAGDAKEMKKFKDMINEMMPLLGANNMGDFVPLIRFFDFGGLVKRMKDVAKKGNLFLQGIIDEIRSERNGGNNMLQHLLTLQKSQPEYYSDVIIKGIIQGMFLAGTDTSAMTLEWAMSALLNHPHILKKAKDEIDTQIGYDRLVDESDISNLPYLQNIIYETLRFYPVAPLLLPRFTSDKFIIEGFTIPRDTIVMINGWAIQRDPKTWSDASCFKPERFEIEGEANKLIAFGFGRRACPGLGLAHRTMGLSLGLLIQCFEWKRLTQEKVDMTESKIGLVMEKLNPLETMCKARPIIKKVIQELNI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04228 492 PANTHER CYTOCHROME P450 82C3-RELATED 16 480 - -
Trre8g04228 492 Pfam Cytochrome P450 33 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 CDD CYP81 64 473 - -
Trre8g04228 492 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Trre8g04228 492 SUPERFAMILY Cytochrome P450 33 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 Gene3D Cytochrome P450 24 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04228 492 FunFam Cytochrome P450 family protein 23 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04228 Trre-Chr8 46843991 46847425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04228 1 487 Cytochrome P450 AT4G37330 50.000 1.25e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04228 K13260 K22932 gmx:100784120 637.876