Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04227 ATGGACCCTTTGTTATATTACTCACTCCTTTCCCTTACTTTCATTTTAACCTTGAAACTTTTACTCCAAAAAATAAATTCAAAAAACCTTCCACCAAATCCATTATTGACTCTTCCCATCATAGGAAACCTTCATAACATAAACCTCCCACTTCACCGTTCACTTCACAACCTTTCACAAAAATACGGCGACATCTTCACCCTATGGTTCGGTTCACGTCGTGTTGTTGTCATATCCTCCCAAACCCTACTTCAACAATGTTTAACCAAACACGATGTTGTTTTATCAAACCGGCCCCGCTTCCTAGTCGGAAAACATTTCTTCTACAATTACACTAGCTTAGACTCTGTCCCATATGGCGATCACTCGCGTAATCTTCGCAGAGTCGTCACTGTTGATGTCCTTTCAACACAACGTCTCAACTCCTTCACAGAAACGCGAAGAAAAGAGGCGTTGAATCTTATAATAAAACTAGCTAAGGACACGTGTGAGGGATTCACACGTGTCGAGCTGAAGACGAGGTTAACAAATATGACGTTTGAGATTATGACGAGAATGGTTGCTGGTGAAGCTACGGAAGGGAAGAAGTTTAAGGATTTGATAAATGAAATGATGCCGCTGCTTGGGGCAAGTAATCAGGGAGATTTTGTGCCTTTAATTAGGTTGTTTGATTTTAAAGGTGTGGTTAAGAGGATGAAGGATATTGGCAAGAGAGGTGATTCGTTTGTGCAAGGAATTGTTGATGAGATTAGAAGTGGGAAGCATGGACGTGGTAATAACATGGTACAACATCTTTTGACTCTACAAAAATCTCAACCTGAGTATTACTCTGATGTGATTATCAAAGGGCTTATTCAGGGTATGTTTCTTGGTGGAACAGACACATCAGCTGTGACTCTAGAGAGGGCTTGTCCTGGATTAGGTTTGGCACATCGCACTATGGGCTTGAGTTTGGGATTATTGATTCAGTGCTTTGAATGGAAACGATTAACTCAAGAAAAAGTGGATATGACAGAAAGTAAAATAGGGCTCGTGATGGAAAAGCATAATCCATTAGAAATAATGTGTAAAGCACGACCAATCATCAAGAAAGTTATCCAAGAATTAAATATCTAG 1116 0.3996 MDPLLYYSLLSLTFILTLKLLLQKINSKNLPPNPLLTLPIIGNLHNINLPLHRSLHNLSQKYGDIFTLWFGSRRVVVISSQTLLQQCLTKHDVVLSNRPRFLVGKHFFYNYTSLDSVPYGDHSRNLRRVVTVDVLSTQRLNSFTETRRKEALNLIIKLAKDTCEGFTRVELKTRLTNMTFEIMTRMVAGEATEGKKFKDLINEMMPLLGASNQGDFVPLIRLFDFKGVVKRMKDIGKRGDSFVQGIVDEIRSGKHGRGNNMVQHLLTLQKSQPEYYSDVIIKGLIQGMFLGGTDTSAVTLERACPGLGLAHRTMGLSLGLLIQCFEWKRLTQEKVDMTESKIGLVMEKHNPLEIMCKARPIIKKVIQELNI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04227 371 SUPERFAMILY Cytochrome P450 27 359 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04227 371 PANTHER CYTOCHROME P450 82C3-RELATED 302 359 - -
Trre8g04227 371 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04227 371 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04227 371 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04227 371 Gene3D Cytochrome P450 20 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04227 371 Pfam Cytochrome P450 32 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04227 Trre-Chr8 46820879 46824517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04227 302 366 Cytochrome P450 AT4G37330 56.923 1.61e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04227 K13260 - gmx:100784120 352.058