Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04226 ATGGACCCTTTGTTATATTACTCACTCCTTTCCCTTACTTTCATTTTAACCTTGAAACTTTTACTCCAAAAAATAAATTCAAAAAACCTTCCACCAAATCCATTATTGACTCTTCCCATCATAGGAAACCTTCATAACATAAACCTCCCACTTCACCGTTCACTTCACAACCTTTCACAAAAATACGGCGACATCTTCACCCTATGGTTCGGTTCACGTCGTGTTGTTGTCATATCCTCCCAAACCCTACTTCAACAATGTTTAACCAAACACGATGTTGTTTTATCAAACCGGCCCCGCTTCCTAGTCGGAAAACATTTCTTCTACAATTACACTAGCTTAGACTCTGTCCCATATGGCGATCACTCGCGTAATCTTCGCAGAGTCGTCACTGTTGATGTCCTTTCAACACAACGTCTCAACTCCTTCACAGAAACGCGAAGAAAAGAGGCGTTGAATCTTATAATAAAACTAGCTAAGGACACGTGTGAGGGATTCACACGTGTCGAGCTGAAGACGAGGTTAACAAATATGACGTTTGAGATTATGACGAGAATGGTTGCTGGTGAAGCTACGGAAGGGAAGAAGTTTAAGGATTTGATAAATGAAATGATGCCGCTGCTTGGGGCAAGTAATCAGGGAGATTTTGTGCCTTTAATTAGGTTGTTTGATTTTAAAGGTGTGGTTAAGAGGATGAAGGATATTGGCAAGAGAGGTGATTCGTTTGTGCAAGGAATTGTTGATGAGATTAGAAGTGGGAAGCATGGACGTGGTAATAACATGGTACAACATCTTTTGACTCTACAAAAATCTCAACCTGAGTATTACTCTGATGTGATTATCAAAGGGCTTATTCAGGGTATGTTTCTTGGTGGAACAGACACATCAGCTCCAGAGAGATTTGAAATAGAAGGCGAAGCAAACAAGTTAATTGCATTTGGTTTTGGAAGGAGGGCTTGTCCTGGATTAGGTTTGGCACATCGCACTATGGGCTTGAGTTTGGGATTATTGATTCAGTGCTTTGAATGGAAACGATTAACTCAAGAAAAAGTGGATATGACAGAAAGTAAAATAGGGCTCGTGATGGAAAAGCATAATCCATTAGAAATAATGTGTAAAGCACGACCAATCATCAAGAAAGTTATCCAAGAATTAAATATCTAG 1164 0.3978 MDPLLYYSLLSLTFILTLKLLLQKINSKNLPPNPLLTLPIIGNLHNINLPLHRSLHNLSQKYGDIFTLWFGSRRVVVISSQTLLQQCLTKHDVVLSNRPRFLVGKHFFYNYTSLDSVPYGDHSRNLRRVVTVDVLSTQRLNSFTETRRKEALNLIIKLAKDTCEGFTRVELKTRLTNMTFEIMTRMVAGEATEGKKFKDLINEMMPLLGASNQGDFVPLIRLFDFKGVVKRMKDIGKRGDSFVQGIVDEIRSGKHGRGNNMVQHLLTLQKSQPEYYSDVIIKGLIQGMFLGGTDTSAPERFEIEGEANKLIAFGFGRRACPGLGLAHRTMGLSLGLLIQCFEWKRLTQEKVDMTESKIGLVMEKHNPLEIMCKARPIIKKVIQELNI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04226 387 Gene3D Cytochrome P450 298 376 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04226 387 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 313 322 IPR017972 GO:0005506|GO:0016705
Trre8g04226 387 Gene3D Cytochrome P450 20 297 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04226 387 PANTHER CYTOCHROME P450 82C3-RELATED 298 375 - -
Trre8g04226 387 Pfam Cytochrome P450 298 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04226 387 Pfam Cytochrome P450 32 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04226 387 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04226 387 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04226 387 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g04226 387 SUPERFAMILY Cytochrome P450 27 375 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04226 Trre-Chr8 46820879 46824517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04226 298 382 Cytochrome P450 AT4G37330 62.353 8.57e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04226 K13260 - gmx:100784120 346.665