Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04191 ATGAGAGGCAGTGGAAGTGACCCATCATCAGAAGAAAGAACAAGAAGAAGAAAAAGAAACATGATGAAAGGTGAGAAAGTTCCTGCATGGTTAGAGAGATTAATGGCTGAAACATTCTTTGGTGTTTGTGGGGTCCATATTAATAGAAGGAAGAACGAGAACAACATTTTTTGCTTACAATGTTGTCTTGCCATCTGCCCTCACTGTCTCCCTTCTCACCCCCATCATCCCCTTCTTCAGGTGAGAAGGTATGTTTACCATGACGTGGTTCGATTGGATGATCTTGAAAAACTCATCGATTGTTCCAATATTCAGCCATATACAATTAACGGTGCAAAAGTGGTATTCTTAAATGAGAGGGTGCAGTCAAGGTCATGCAAAGGCAGCAGCAGCAGTAATGCCAACTCTTGCTGCTCTTGTGACAGGATTCTTCAGGAGCCCTTCCATTTCTGTTCTCTCTCATGCAAGGTTGATCACATGGTATGCATGGGTGAAAGCTTGTCAAGCATATTACATCGATTCCTTGAATCAGATTTTTCATATTCACAGTTTGAGGGTTTAAGGGTGGATTGCTCTGAAGTTATTGATGAAGATAATACCCAATTTGCCCCTACTTTTTCTTACTCAAATACTGAGGAAGCTACAAGCCAATCTATGAATAATATTTCATGTGAAGAACCCTACAATAACAACAACAACAACAACAACAAAAGCAATGGTTTCTTCCTTTCTCTTGGAAGCTGCAGGAGAAAGGGTGCTCCTAAGAGATCTCCTCTATCCTAA 783 0.4074 MRGSGSDPSSEERTRRRKRNMMKGEKVPAWLERLMAETFFGVCGVHINRRKNENNIFCLQCCLAICPHCLPSHPHHPLLQVRRYVYHDVVRLDDLEKLIDCSNIQPYTINGAKVVFLNERVQSRSCKGSSSSNANSCCSCDRILQEPFHFCSLSCKVDHMVCMGESLSSILHRFLESDFSYSQFEGLRVDCSEVIDEDNTQFAPTFSYSNTEEATSQSMNNISCEEPYNNNNNNNNKSNGFFLSLGSCRRKGAPKRSPLS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04191 260 ProSiteProfiles Zinc finger B-box type profile. 42 92 IPR000315 GO:0008270
Trre8g04191 260 MobiDBLite consensus disorder prediction 1 21 - -
Trre8g04191 260 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 21 259 - -
Trre8g04191 260 Pfam PLATZ transcription factor 82 157 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04191 Trre-Chr8 46521606 46527529 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre8g04191 PLATZ 7.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04191 - - tpra:123914605 416.001