Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g04181 ATGCTTAACAGGAACTGGGTTTTAAAGCGCAAGCGGAGAAAACTTCCCGTAGCACTGGATCAGTCCGTTGGTAAAGAGAAATCCAATGGTAAAGAAGATAATTCAGTAGCATCTGAATCTTCTAGGAATGCTTCAGCTAAACGTATGCTAAAGACTGATGAAGGCACTGCTCAAACTTCTAAGAAGAAGGGGCATGACGGGTATTTCTATGAATGCGTGATTTGCGATCTTGGTGGCAACTTATTGTGCTGTGATAGCTGTCCTCGCACTTATCATTTACAGTGTCTTGACCCTCCTCTTAAGCGTATCCCTATGGGGAAGTGGCAATGTCCAAGGTGCTTTGAAGAAAATGATCAAGTAAAGCCCGTAGACCACCTGGATTCAATTTCAAAACGAGCGAGGACGAAGACTGTACCTGTAAAATCAAAAGCTGAAGTTAACCCCATCAACCTGGAAAAGGTTTCTGGAATTTTTGGAAATAAACATGTTTCAAAAAAAAGGTCAACCAAAGCAAAATCTGTTTCAACTATGGGAGGCAAATTCTTTGGAGTGAAACCATTGTCTTCTCCAGTGGAAGCAACTTGTAGCGACAAGCCAATGGACCCATCTCTTGAGAGTTGCAAGGAAGGAACTTCATCATGTGTGGATGCTGATGACAAGAACTTGAACTTGTCCCCAACAGTCTCACCTAAGGACACAATACCAGCTTCACCTGATAAGGAAGTTTTATCTCCCTCAAAAATTACTAATTTAGATGCAAATGATGACTTGCTGGAAGAGAAGCCTGATTTATCTTGTGATAAAATTCCATTTAGAAAAACACTTGTTCTTGGTATTACTGCTGGTGGAGAGGAAATGAGGAAAAGGAAGCTTAAAGTTATTAATGATAATTCTAATCAAAAGAAGCGTAGGACTGAAAAGGGGAAATTTTTTGCCGTTACTCCTACAAAGTCAAAGTCTGGAAATAATAAAGTACACAAAAAGCAAAAGTCCAAAACACACAAAATTTCCACATCTATATCAAAAGGGGACGTTGGAAAAAAGAAATCTGATGTCCAGCGGAAAGATAAGAAGTTCTCTCAGGTAATGAAAGACACATCAAATGAGCTTGATAAAGCAGGAAGCCACTTGGACGGAACTTTATTGAATGAAGACAGTGCTATCCTTGAATCTCTGCAGGTTGACCGAGTCTTGGGGTGTCGAATACAAGGTGAGGACACAAACTCCATACGGCCCTTATCCTTGAAAGCTGGGGATGACTCACCTTCCGTCGACCTGGTAATGTCAGAAAACCAGAAGCTAGATGAAGATAATTCTGCTTGTGATAATGATGTGGATGTTGAAATAGCCGAAAATCTTGATGATCCTCAAAATGTCAAAAGTTCTGATGAAGGGAAGTTGAAAACCACCGATGGAGTGGAAAGAATTCAGGTATACAGGAGATCAATACCAAAGGAAAATAAGAATGGAAATCTCATAAATTCATTGAGTAAAGCCACTGATGATTTAGGCTCTTGTGCCAGGGATGGCACAGATCAGGATGATTATGAGGTATCTGCTGAGCAGTTGGAAAAGGCAAATGCCTTGTTGGAGACAGAGGAGAATCTTAATGTTGTTTTAAGAGGTGACAGTGAGCTTCCAAAAAATTGTGAAATGCATGACTCTCTTAAAACTAAACAAAAGGAAGTGGATGTGGAGAAGGGAATGGGTAGCAGTGTTGATAATAAAGTTCAGGATGCTATTGGGGTTGAATCTGCTTGTCCAAATGGAGATAAAGTTTCCTATGAATTTTTAGTTAAGTGGGTAGGAAAGTCTTATATTCATAGTAGTTGGATTTCTGAATCCCACTTAAAAGCTATTGCAAAGAGAAAACTAGAAAATTACAAGGCAAAATATGGAACGGCGACAATAAATATTTGTGAGGAACAATGGAAGAATCCGGAGAGGTTGCTTGCTATTCGCAATTCCAAACATGGAGCATCTGAAGCTTTTGTTAAGTGGACCGGAAAACCTTATGATGAGTGCACTTGGGAAAGTTTAGATGAACCTGTGCTTCAAAATTCTTCTCATTTGATTACATGTTTTAAAATGTTTGAAACTCTCACATTGGAAAGGGATGCATCAAAGGAAAATTCAACTAAAAAAAGCAGTGACCGTCAAAATGATATAGTTAATCTTGTAGAGCAGCCTAAAGAGCTAAAAGGTGGTTCTTTGTTTCCCCATCAGCTTGAGGCTCTGAACTGGTTGCGTAAATGCTGGTATAAGTCCAAGAATGTGATACTTGCTGATGAGATGGGGCTTGGGAAAACAATATCTGCTTGTGCTTTTATTTCATCTTTGTATTTTGAATTTAAAGTTTCACGTCCTTGTTTGGTCCTAGTACCTCTTGTCACAATGGGCAATTGGCTTGCTGAATTTGCACTATGGGCTCCAGATGTGAATGTTGTTCAATATCATGGCTGTGCAAAAGCAAGAGCCATAATTAGGCAGTATGAATGGCATGCAAGCGATCCAAGTGGATTGAATAAGAAAACAGAAGCCTATAAATTTAATGTGCTTTTGACTTCATATGAAATGGTTCTTGCTGATTATTCACATTTTCGGGTAGTTCCTTGGGAAGTTCTTGTTGTTGACGAGGGTCATCGACTGAAGAATTCAGAAAGTAAGCTGTTCAGCTTGCTAAATTCAATCTCTTTTCAACAGCGTGTTCTGTTGACGGGCACCCCTCTCCAGAACAACCTTGGTGAGATGTACAACTTGCTTAATTTCTTACAGCCAGCATCATTTCCTTCCCTATCTTCATTTGAGGAGAGATTTAATGATCTTACAAGTGCAGAGAAAGTTGATGAATTGAAAAAACTAGTTTCTCCTCATATGCTTCGGAGACTTAAAAAGGATGCCATGCAAAATATTCCCCCTAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTATCGTGCAATGCTTACAAAGAATTATCAAATATTGCGGAATATTGGGAAAGGTATTCCTCAGCAATCTATGCTGAACATTGTGATGCAACTGAGGAAAGTCTGCAATCATCCATATCTCATACCAGGAACTGAGCCTGACTCTGGATCTGTTGAGTTTCTTCATGAAATGAGAATAAAGGCTTCAGCTAAGTTGACTCTTCTGCATTCTATGCTAAAGATTTTGTATAGGGAAGGTCATAGGGTTCTTATTTTCTCACAAATGACAAAGCTTCTTGACATCCTGGAGGACTATTTGAATATCGAATTTGGGCCTAAAACATATGAGAGAGTGGATGGCTCTGTGTCTGTAGCAGATCGTCAGACAGCAATTGCACGCTTCAACCAAGACAAAAGTCGATTTGTTTTCTTACTATCCACCCGATCTTGTGGACTTGGGATAAATTTGGCCACTGCTGACACTGTCATCATCTATGATTCTGATTTCAACCCTCATGCAGATATTCAAGCAATGAATCGAGCACACAGAATTGGGCAATCAAATAGACTTTTAGTATACCGGCTTGTGGTTCGTGCCAGCGTTGAAGAGCGCATCTTGCAGCTTGCTAAAAAGAAATTGATGCTTGATCAGCTTTTTAAAGGTAAATCTGGATCTCAAAAAGAAGTAGAAGATATTTTAAAATGGGGAACTGAAGAACTCTTCAATAACTCTTGTGGACTGAATGGAAAAGATACAAGTGAGAATAATAATAGTAACAAAGATGAGGCAGTAGCAGATATAGAACATAAGCATCGGAAGAGGACTGGTGGTCTTGGTGATGTATACGAGGATAAGTGTACAGATAGCAGCAGCAAGATTTTGTGGGATGAAAATGCCATTTTAAAATTGCTTGATCGTTCAAACCTTCAAGATGCTTCAACTGATATCGCTGAAGGGGATTCTGAGAATGATATGCTGGGCTCAATGAAGGCCCCTGAGTGGATTGACGAACCGACTGAAGAACATGTAGAGGGTGAATCTCCTCCTCATGGAACTGATGACATGTGTGCACAAAACTCTGAGAAGAAAGAGGATAATGCAGTGATTGGTGGTGAAGAAAATGAATGGGACCGGCTATTGCGTTTGAGGTGGGAGAAATATCAGAGCGAGGAGGAAGCAGCGCTTGGTCGAGGGAAGCGACAGAGGAAAGCTGTTTCTTATAGAGAAGTATACGCTCCACACCCAATTGAAGCAGTGACTGAGAATGGCGTTGAGGAGGAAAAAGAAAAAGTACCTGAACCTGAGCGTGAATATACACCGGCAGGACGAGCCCTGAAAGCAAAATTTGCTAAACTCCGTGCTCGACAGAAGGAACGACTTGCTCAGAGGAATGCAGTTACAGAATCACATCCTGCTGAAGGACTTCCTGGTACCGAGCCACCCGTGCATCCTCCAGTCATTGCCAAGGATGGAGATCTAGGAGCTGGGCCGACCCATTCAGTTCAAGAAGGAACTTCTATCAACATAGAGGACAACAAAAATACTCAACTTTCAGAAGCTCAAAATAGCAATGCTGACTCCATATCAAGGATCGAGAATATTTCAAAACATAAAATGAGCCATCACTTTGATGTTTCTGCCAATAATCCAGGCCAATCATTACCGGAATTTTTGCCTCCAAATTACCACAATAAAGGGAGGATTAACATGACAAACTCTATGCCAAGCAACAATCTGTTGCCCGTTCTAGGACTCTGTGCTCCTAATGCTAGTCAAATAGAATCATCAGAGGGTAACACTTCAAAGTTAAATTGGAGACAAAATAGGCACGGAGCCAGACAAGATTTTCCATTCAGCCTTGCTCCTTGCACTGGGACATCCATGGATGCTGAGGCGAGAAGTAAGGAAAAGGCAGCAAATACCAAAATGTCGGATGCATCAACAGAAAACTTACAACGAAGTTTCAAAAATAGCATCCCTGATAACTTTCTCCCATTTCTTCCATTTCCACCCTCTATGCAAGGAAAGGAATCTGATGCATTTGAGAGTCAAGGTGCTAGATTCTCTGCTTTCCAGGAGAAAATGGCCCTGCCAAATCTGCCTTTCGATGAAAGATTGTTGGCGAGATTTCCACTCACAACTAAGAGCATTCCAAATTCACATCCGGACCTCTTACCTAATTTGTCTTTAGGAGGCAGACTTGAAGCTCTGAATGGATCTATGCAAGACCTCCCAACATTACCTAATTTCAAAATACCCCCTGAAGATTTATTTAGATATAATCAGCAAGACAGGGATGTGCCGCCCACCTTGGGTTTAGGACAAAGGCCAACCACACTATCATCATTCCCAGAAAACCACCGGAAAGTTCTTGAAAACATAATGATGAGAACAGGCTCTGGACCAAGTAGTTTATTAAGAAAGAAGTCAAAATCAGATGGTTGGTCGGAAGATGAACTTGATTCCCTCTGGATTGGTGTTCGTAGGCATGGAAGGGGTAATTGGGATGCCATGCTCAGAGATACCAAGTTAAAGTTTTCAAAGTATAAAACATGTGAAGAATTATCAGTGAGGTGGGAGGAGGAACAAGTAAAGGTCTTTCAGGGGCCAGCTTTTCCTGTGCAAAGATCATCTTCCAAGACAACCAAGACTACCAAATCTTCACATTTTCCAATCTCTGACGCAATGATGGAAAGGGCCTTGCAAGGCAGCAAATTTCTTTTACCGCCAAAATTTCAAAACCACCATCTGACTGACATGAAATTAGGATTAGGTGGTCCTGCATCTGGTCTTCCACATTTTAGAACAATAGATCGACCTAGTCTGCAAAATGATCACTTTGCACCTCTTCCTTCTTGGAGCCATGATATAAACAGATCAAAGTTTATTGATGATGCTTCTGCTGAAACATCTGACAGACCAGGAACTTCTTCCAATGTGCCGACAGAAAGACCATTTCTGCTCAATTCTTTTGGAACAAGCAGCTTGAGTTCTTTAGGTTTGAATTGCTCAGGCAACATTAATACACAACAACAGGAGGATGAGCGTGTAAACACCAAGCGTGGAAAGTTGCCTGTACTTCTGGATGAATCACTGAACGACATGCATGATAGTAGCACTGGATTGTTATCCAACCCCATTAAACCACACATGAATTCAAAAGGGGAAGAAATAGCTGGAAGTAGTTCTTCGAAAGACAAGCTTCCCCACTGGTTACGACAAGCTGTGGGTTCCCCTGTCAAACTTCCTGATCCTGAACTCCCTCCCACAGTATCAGCCATTGCTCATTCAGTTCGCATGCTCTATGGAGATGATAAGCCTACAATTCCTCCATTTGTGATCCCCGGACCACCCCCGTCCTTACCGAAGGACCCCAGGAGTAGTCTCAAGAAGAAAAGGAAGAGAAGATCACACAAGCTGTTTCTTCCAGATTATTCTCCAGACTTTCACAGCAGCTACCATGGTGATAATGGTGCTTCAAGCTCAACTCCTTTCCCGCCACCATTTCCTCTACTTCCTCCGTCAGGACCTCAGCAGATTGAGTCTGACCTCAACTTGCCCCCTCTTAATTTAAAAGTGGCAAACCCATCACACTCATCGAAAAAGACAAGCTCAGGACTATCTCCTTCCCCTGAAGTGCTCCAGTTGGTCGCAGCCTGTGTTGCTCCTGGCCCTCATCTTCCCTCAATCCCCAGTTCTTCAAGCTTTCTTGAGAGCAAGCTTCCATTGCCAACAAGGCCAGTTGGCAAAGCCAAATTCAAAGACTCAGAAGGTGCCTTAAAAAATAAGAAGCCTAGGAAGACTTCACCAGAAAATTGGAGTTCACCTGAAGAGCATAAAGTAGAACAAGTCCCTGATAGTGGAGATTCCAGTAAGACTCAGTCAGATCCCTCCCGGGTTGAACAGCCCCATGTAGAGGAGGTATCATCTGAGGGAACTGTCTCAGATCATGATGCGAAGAATCAGGAAACATAA 6924 0.4165 MLNRNWVLKRKRRKLPVALDQSVGKEKSNGKEDNSVASESSRNASAKRMLKTDEGTAQTSKKKGHDGYFYECVICDLGGNLLCCDSCPRTYHLQCLDPPLKRIPMGKWQCPRCFEENDQVKPVDHLDSISKRARTKTVPVKSKAEVNPINLEKVSGIFGNKHVSKKRSTKAKSVSTMGGKFFGVKPLSSPVEATCSDKPMDPSLESCKEGTSSCVDADDKNLNLSPTVSPKDTIPASPDKEVLSPSKITNLDANDDLLEEKPDLSCDKIPFRKTLVLGITAGGEEMRKRKLKVINDNSNQKKRRTEKGKFFAVTPTKSKSGNNKVHKKQKSKTHKISTSISKGDVGKKKSDVQRKDKKFSQVMKDTSNELDKAGSHLDGTLLNEDSAILESLQVDRVLGCRIQGEDTNSIRPLSLKAGDDSPSVDLVMSENQKLDEDNSACDNDVDVEIAENLDDPQNVKSSDEGKLKTTDGVERIQVYRRSIPKENKNGNLINSLSKATDDLGSCARDGTDQDDYEVSAEQLEKANALLETEENLNVVLRGDSELPKNCEMHDSLKTKQKEVDVEKGMGSSVDNKVQDAIGVESACPNGDKVSYEFLVKWVGKSYIHSSWISESHLKAIAKRKLENYKAKYGTATINICEEQWKNPERLLAIRNSKHGASEAFVKWTGKPYDECTWESLDEPVLQNSSHLITCFKMFETLTLERDASKENSTKKSSDRQNDIVNLVEQPKELKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTISACAFISSLYFEFKVSRPCLVLVPLVTMGNWLAEFALWAPDVNVVQYHGCAKARAIIRQYEWHASDPSGLNKKTEAYKFNVLLTSYEMVLADYSHFRVVPWEVLVVDEGHRLKNSESKLFSLLNSISFQQRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSSFEERFNDLTSAEKVDELKKLVSPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGIPQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILYREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFKGKSGSQKEVEDILKWGTEELFNNSCGLNGKDTSENNNSNKDEAVADIEHKHRKRTGGLGDVYEDKCTDSSSKILWDENAILKLLDRSNLQDASTDIAEGDSENDMLGSMKAPEWIDEPTEEHVEGESPPHGTDDMCAQNSEKKEDNAVIGGEENEWDRLLRLRWEKYQSEEEAALGRGKRQRKAVSYREVYAPHPIEAVTENGVEEEKEKVPEPEREYTPAGRALKAKFAKLRARQKERLAQRNAVTESHPAEGLPGTEPPVHPPVIAKDGDLGAGPTHSVQEGTSINIEDNKNTQLSEAQNSNADSISRIENISKHKMSHHFDVSANNPGQSLPEFLPPNYHNKGRINMTNSMPSNNLLPVLGLCAPNASQIESSEGNTSKLNWRQNRHGARQDFPFSLAPCTGTSMDAEARSKEKAANTKMSDASTENLQRSFKNSIPDNFLPFLPFPPSMQGKESDAFESQGARFSAFQEKMALPNLPFDERLLARFPLTTKSIPNSHPDLLPNLSLGGRLEALNGSMQDLPTLPNFKIPPEDLFRYNQQDRDVPPTLGLGQRPTTLSSFPENHRKVLENIMMRTGSGPSSLLRKKSKSDGWSEDELDSLWIGVRRHGRGNWDAMLRDTKLKFSKYKTCEELSVRWEEEQVKVFQGPAFPVQRSSSKTTKTTKSSHFPISDAMMERALQGSKFLLPPKFQNHHLTDMKLGLGGPASGLPHFRTIDRPSLQNDHFAPLPSWSHDINRSKFIDDASAETSDRPGTSSNVPTERPFLLNSFGTSSLSSLGLNCSGNINTQQQEDERVNTKRGKLPVLLDESLNDMHDSSTGLLSNPIKPHMNSKGEEIAGSSSSKDKLPHWLRQAVGSPVKLPDPELPPTVSAIAHSVRMLYGDDKPTIPPFVIPGPPPSLPKDPRSSLKKKRKRRSHKLFLPDYSPDFHSSYHGDNGASSSTPFPPPFPLLPPSGPQQIESDLNLPPLNLKVANPSHSSKKTSSGLSPSPEVLQLVAACVAPGPHLPSIPSSSSFLESKLPLPTRPVGKAKFKDSEGALKNKKPRKTSPENWSSPEEHKVEQVPDSGDSSKTQSDPSRVEQPHVEEVSSEGTVSDHDAKNQET 2307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g04181 2307 Gene3D - 556 632 - -
Trre8g04181 2307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 127 IPR013083 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 2092 2192 - -
Trre8g04181 2307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 964 1214 IPR027417 -
Trre8g04181 2307 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1057 1216 IPR001650 -
Trre8g04181 2307 SMART chromo_7 391 633 IPR000953 -
Trre8g04181 2307 SMART chromo_7 643 703 IPR000953 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 225 244 - -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 1482 1508 - -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 321 335 - -
Trre8g04181 2307 ProSiteProfiles Myb-like domain profile. 1790 1846 IPR001005 -
Trre8g04181 2307 Pfam SNF2-related domain 756 1031 IPR000330 GO:0005524|GO:0140658
Trre8g04181 2307 Gene3D - 1763 1882 - -
Trre8g04181 2307 SUPERFAMILY FYVE/PHD zinc finger 64 114 IPR011011 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 294 310 - -
Trre8g04181 2307 Gene3D - 972 1199 IPR027417 -
Trre8g04181 2307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 718 962 IPR027417 -
Trre8g04181 2307 ProSitePatterns Zinc finger PHD-type signature. 72 113 IPR019786 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 46 63 - -
Trre8g04181 2307 CDD CD1_tandem 565 629 - -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 2175 2192 - -
Trre8g04181 2307 SMART ultradead3 734 938 IPR014001 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 1599 1632 - -
Trre8g04181 2307 Gene3D - 729 971 IPR038718 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 2206 2307 - -
Trre8g04181 2307 SMART helicmild6 1083 1168 IPR001650 -
Trre8g04181 2307 Pfam CHD subfamily II, DUF1087 1357 1392 IPR009463 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 2093 2107 - -
Trre8g04181 2307 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 750 927 IPR014001 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 2233 2269 - -
Trre8g04181 2307 Pfam PHD-finger 72 114 IPR019787 -
Trre8g04181 2307 SUPERFAMILY Chromo domain-like 638 683 IPR016197 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 1405 1425 - -
Trre8g04181 2307 Pfam Helicase conserved C-terminal domain 1058 1168 IPR001650 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 18 63 - -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 1230 1251 - -
Trre8g04181 2307 SUPERFAMILY Chromo domain-like 562 633 IPR016197 -
Trre8g04181 2307 Coils Coil 513 536 - -
Trre8g04181 2307 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 301 2260 - -
Trre8g04181 2307 Pfam Chromo (CHRromatin Organisation MOdifier) domain 591 630 IPR023780 -
Trre8g04181 2307 Pfam Chromo (CHRromatin Organisation MOdifier) domain 647 695 IPR023780 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 18 33 - -
Trre8g04181 2307 ProSiteProfiles Zinc finger PHD-type profile. 69 116 IPR019787 -
Trre8g04181 2307 FunFam chromodomain-helicase-DNA-binding protein 1-like isoform X1 972 1199 - -
Trre8g04181 2307 SMART PHD_3 71 114 IPR001965 -
Trre8g04181 2307 CDD PHD2_CHD_II 72 113 - -
Trre8g04181 2307 ProSiteProfiles Chromo and chromo shadow domain profile. 563 631 IPR000953 -
Trre8g04181 2307 SMART DUF1087_2 1337 1398 IPR009463 -
Trre8g04181 2307 ProSiteProfiles Chromo and chromo shadow domain profile. 645 713 IPR000953 -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 2282 2307 - -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 341 359 - -
Trre8g04181 2307 Gene3D - 647 696 - -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 294 359 - -
Trre8g04181 2307 MobiDBLite consensus disorder prediction 1437 1508 - -
Trre8g04181 2307 CDD SF2_C_SNF 1052 1179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g04181 Trre-Chr8 46417131 46430858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g04181 718 1211 RAD5 or RAD16-like Gene Family AT1G02670 26.884 9.58e-38 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Trre8g04181 SNF2_N 8.7e-56 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g04181 - - gmx:100793933 3422.48